PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022720943.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 188aa    MW: 20881.2 Da    PI: 10.1676
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022720943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.12e-221153345
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    ++n+s rqvtfskRr g++KKA+EL +LC+a+va+++fs+ gk
  XP_022720943.1 11 VKNSSSRQVTFSKRRSGLFKKANELAILCGAQVAIVVFSPGGK 53
                    69**************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MGRRKIEMEI VKNSSSRQVT FSKRRSGLFK KANELAILCG AQVAIVVFSP GGKPFSFGHP  60
SVEAVAQRFL YQDAKPKVSI PGQVECQQES QVEKLGQQLN GLLKQLQAEK KGGDMVDKAI  120
KAIGKHEYGK PINELNMHEL LEMKQSMEKL RENLKLRVSE IEASSSLLLL STNPVKVADR  180
EKLSSQSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.11e-35M-type_MADS family protein