PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720955.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 264aa MW: 30423 Da PI: 9.9634

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.1	1.7e-31	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ XP_022720955.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 58 79***********************************************8 PP
2	K-box	112.7	3.6e-37	77	171	5	98
K-box 5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 s++ ++ea+a+ +qqe++kL+k+i+nLq ++Rh++Ge+L+sL +k+L++L ++Lek+l++iR+kKnell+++ie++qk+e +lq++n+ Lr+k+ XP_022720955.1 77 SNTGsVSEATAQFYQQEADKLRKQIRNLQDTNRHMVGESLGSLPMKDLKSLGTRLEKGLSRIRAKKNELLFAEIEYMQKREIDLQNNNQLLRAKV 171 344459**************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYANN 60 SVKTIIERYK KASADSSNTG SVSEATAQFY QQEADKLRKQ IRNLQDTNRH MVGESLGSLP 120 MKDLKSLGTR LEKGLSRIRA KKNELLFAEI EYMQKREIDL QNNNQLLRAK VLSFLSFVNE 180 WCSTVLLSLY LAIIETLMTR GPLYFMLQIA ENERKQQNMN LMPGGSNFEV MHSQPFDSRN 240 FFQINALQPA NHYPHQDQMA LQLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	1e-112	MIKC_MADS family protein