PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022720956.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 241aa    MW: 27829.8 Da    PI: 10.2397
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022720956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.31.5e-312473150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
  XP_022720956.1 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 73
                    79***********************************************8 PP
2K-box1156.9e-38921885100
           K-box   5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     s++  ++ea+a+ +qqe++kL+k+i+nLq ++Rh++Ge+L+sL +k+L++L ++Lek+l++iR+kKnell+++ie++qk+e +lq++n+ Lr+k+
  XP_022720956.1  92 SNTGsVSEATAQFYQQEADKLRKQIRNLQDTNRHMVGESLGSLPMKDLKSLGTRLEKGLSRIRAKKNELLFAEIEYMQKREIDLQNNNQLLRAKI 186
                     344459****************************************************************************************9 PP

           K-box  99 ee 100
                     +e
  XP_022720956.1 187 AE 188
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MVYPNESRET PLQKKMGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL  60
IVFSSRGRLY EYANNSVKTI IERYKKASAD SSNTGSVSEA TAQFYQQEAD KLRKQIRNLQ  120
DTNRHMVGES LGSLPMKDLK SLGTRLEKGL SRIRAKKNEL LFAEIEYMQK REIDLQNNNQ  180
LLRAKIAENE RKQQNMNLMP GGSNFEVMHS QPFDSRNFFQ INALQPANHY PHQDQMALQL  240
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.11e-121MIKC_MADS family protein