PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721020.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 359aa MW: 40982.8 Da PI: 6.6118

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	67.4	2.6e-21	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d++k++G+g+W+t +++ g+ R++k+c++rw +yl XP_022721020.1 14 KGPWTPEEDQRLIDYIKKHGNGNWRTLPKHAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.7	9.7e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e++++++ G++ W++Ia++++ gRt++++k++w+++ XP_022721020.1 67 RGRFSFEEEEIIIQLHSIVGNK-WSAIASRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MGRTPCCDKN GLKKGPWTPE EDQRLIDYIK KHGNGNWRTL PKHAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEEIIIQ LHSIVGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSILR SSLCNQSQMN MSRLLGVQSL VNPELLRLAT SLMSSQRQNQ 180 NQNFLLQNVQ ENQLCSSQVQ NQYQPVMQSN HLPTQLQEIP SCTSLNLPCS IQFSNEAQHM 240 NPNVGQFPSN ITDTNDWQGN AMTSNLTEDY VPIPPNYNYY GSDETVMDPS SETSNFQSNN 300 SNQSFSFTSV LSTPSSSPTP LNSNSTYINS SCTEDERESY CSNILKFEIA DIWDVNEFM

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MGRTPCCDKN GLKKGPWTPE EDQRLIDYIK KHGNGNWRTL PKHAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEEIIIQ LHSIVGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSSILR SSLCNQSQMN MSRLLGVQSL VNPELLRLAT SLMSSQRQNQ  180
NQNFLLQNVQ ENQLCSSQVQ NQYQPVMQSN HLPTQLQEIP SCTSLNLPCS IQFSNEAQHM  240
NPNVGQFPSN ITDTNDWQGN AMTSNLTEDY VPIPPNYNYY GSDETVMDPS SETSNFQSNN  300
SNQSFSFTSV LSTPSSSPTP LNSNSTYINS SCTEDERESY CSNILKFEIA DIWDVNEFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-101	MYB family protein