PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721025.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 476aa MW: 52211 Da PI: 5.2731

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.9	1.4e-06	366	404	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R ++i +++ L++l+ + +K + a++L++A+eYIk L XP_022721025.1 366 VRKEKIGDRITALQQLVSPF-----GKTDTASVLQEAIEYIKFL 404 5778999*********98.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MAEEFHSGIC GWTWWNSSKT MFSGCSSPCS TGIVDMGSCG WATDMVDIKA RSCDQESNNS 60 VSDHSSIVFQ GAHHQKPQQA DADSGGSCIL IDSTLQMMGF GLSSSTTSDW NQSLLTQNNG 120 RPESYNSVLQ EDINSRLSYR QEPGMDSSQI QTDWSPKRYT SPEEDSSITT FKPINQDFSL 180 DQQTLNSITS SDNSTPTCQG LSAGFPMDSA SYGCPSTLLQ SLFEPDLQPQ QHSLFNNRSI 240 NYMSATSTFG ANGNELSPSW PKLAPFIRPS LPKQQPSSLH FSNNTPFWNA SATGINDVKA 300 GFLPSPQSQF LVQTLEEKPN CPSLTTKTNA EEIRNSGTSA MKKGSSEPPF KRTRIETPSP 360 LPTFKVRKEK IGDRITALQQ LVSPFGKTDT ASVLQEAIEY IKFLHDQVSV LSTPYMKQAA 420 ASIQQLQSTD KLKDPEGPKQ DLRSRGLCLV PISSTFPVAN ETTADFWTPK FGGTFR

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MAEEFHSGIC GWTWWNSSKT MFSGCSSPCS TGIVDMGSCG WATDMVDIKA RSCDQESNNS  60
VSDHSSIVFQ GAHHQKPQQA DADSGGSCIL IDSTLQMMGF GLSSSTTSDW NQSLLTQNNG  120
RPESYNSVLQ EDINSRLSYR QEPGMDSSQI QTDWSPKRYT SPEEDSSITT FKPINQDFSL  180
DQQTLNSITS SDNSTPTCQG LSAGFPMDSA SYGCPSTLLQ SLFEPDLQPQ QHSLFNNRSI  240
NYMSATSTFG ANGNELSPSW PKLAPFIRPS LPKQQPSSLH FSNNTPFWNA SATGINDVKA  300
GFLPSPQSQF LVQTLEEKPN CPSLTTKTNA EEIRNSGTSA MKKGSSEPPF KRTRIETPSP  360
LPTFKVRKEK IGDRITALQQ LVSPFGKTDT ASVLQEAIEY IKFLHDQVSV LSTPYMKQAA  420
ASIQQLQSTD KLKDPEGPKQ DLRSRGLCLV PISSTFPVAN ETTADFWTPK FGGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	3e-78	bHLH family protein