PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022721034.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 744aa    MW: 82392.7 Da    PI: 8.4697
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022721034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.65.7e-15931321756
                     HHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  17 elFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_022721034.1  93 RFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 132
                     68***********************************998 PP
2START219.41.1e-682664851206
                     HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     ela +a++el+++a ++ p+Wv      + +n+de+l++f+++ +      ++ea+r+s+vv+m++++lve+l+d++ qW+  +     +a+tle
  XP_022721034.1 266 ELAVAAMEELIRMAHSGLPLWVPGEnstDVLNEDEYLRTFPRGIGpkplgLRSEASRESAVVIMNHVNLVEILMDVN-QWSSVFCgivsRAMTLE 359
                     57899*****************9888889*************999********************************.******99999****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+s+g      galq+m+ae+q++splvp R+ +fvRy++q+++g+w++vdvS+d+ ++ p    + +++++pSg+li++++ng+skvtwvehv+
  XP_022721034.1 360 VLSTGvagnynGALQVMTAEFQVPSPLVPtRENYFVRYCKQHTDGTWAVVDVSLDNLRPSP----MSKCRRRPSGCLIQELPNGYSKVTWVEHVE 450
                     ***********************************************************99....788999************************ PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r+ h+++r+l++sgla+gak+wvatl+rqce+
  XP_022721034.1 451 VDDRTAHNMYRPLINSGLAFGAKRWVATLDRQCER 485
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 744 aa     Download sequence    
MIMRLNQVLK PWMLPREMIR ILTSARKRSV TIGTPSVKSR RWKRESFFSY NVYVCHWMSI  60
YKKLEMRVRG RLKKLVLLRR VDFFWVFETV FLRFFKECPH PDDKQRKELS RELGLEPLQV  120
KFWFQNKRTQ MKAQHERHEN AILNAENEKL RAENNRYKEA LSNATCPNCG GPAALGEMSF  180
DEQHLRIENS RLKEEIDRIS GAAAKYVGKP LTSFPHLSTH LHSRSLNLGA SNFGTQSGFV  240
GDMYGGSDLL RSVSGPTEAD KPMIVELAVA AMEELIRMAH SGLPLWVPGE NSTDVLNEDE  300
YLRTFPRGIG PKPLGLRSEA SRESAVVIMN HVNLVEILMD VNQWSSVFCG IVSRAMTLEV  360
LSTGVAGNYN GALQVMTAEF QVPSPLVPTR ENYFVRYCKQ HTDGTWAVVD VSLDNLRPSP  420
MSKCRRRPSG CLIQELPNGY SKVTWVEHVE VDDRTAHNMY RPLINSGLAF GAKRWVATLD  480
RQCERLASSM ASNIPAGDLC VITSPEGRKS MLKLAERMVT SFCTGVGAST AHAWTTLSAT  540
GSDDVKVMTR KSMDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRS EWDILSNGGL  600
VQEMAHIANG RDPGNCVSLL RVNSANSSQS NMLILQESCS DVTGSYVIYA PVDIISMNVV  660
LSGGDPDYVA LLPSGFAILP DGPGLNGGGI LEIGSGGSLL TVAFQILVDS VPTAKLSLGS  720
VATVSSLIKC TVERIRAAVM CDNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.20.0HD-ZIP family protein