PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721328.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 571aa MW: 63216 Da PI: 7.227

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	69.2	5.5e-22	127	227	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+++ ++++ + +l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + XP_022721328.1 127 FCKTLTASDTSTHGGFSVLRRHADDClppldmtQQPPWQ--ELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--RGA 217 99**************************975444444..8********************************************..348 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++el+v+v+r XP_022721328.1 218 NGELRVGVRR 227 9999*997 PP
2	Auxin_resp	114.5	9.8e-38	253	335	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+s+F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+e+++err+sGt+vgv d +++ W +S+WrsLk XP_022721328.1 253 ASHAIATRSMFSVFYKPRTSRSEFIVSVNKYLEARNSKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNKSTGWADSEWRSLK 335 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MAFAASNLPS AEQQTGVIDD SLYRELWHAC AGPLVTLPRD GERVYYFPQG HMEQLEASMH 60 QGLEHQMPSF NLPSKILCKV ASVQLKAEPD TDEVYGQITL VPEADQSEVT SPDDPLPAPE 120 RCIVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMTQ QPPWQELVAT DLHGNEWHFR 180 HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRGANGE LRVGVRRLMR QQANMPSSVI 240 SSHSMHLGVL ATASHAIATR SMFSVFYKPR TSRSEFIVSV NKYLEARNSK LSVGMRFKMR 300 FEGEEVPERR FSGTIVGVGD NKSTGWADSE WRSLKVQWDE PSSILRPDRV SPWELELLVA 360 TNTSSNSPPA QRNKRARPSV LPSSSSDLSS LVGMRKSPVE SSAFSYCEAQ RGQPSPKFSS 420 AGKPNSVSFS GNGSLAAASS NLTYWSNRVE SVRESFAPVV SKESYERKQG TGNGCRLFGI 480 QLLDNVNMEE NSPVATVSGT GGDDRPVPSL DADSDQHSDP SNLNRSDLPS ISCDPEKSCM 540 RSPQEWQSKQ IRSCTKVIQS HFFLFPNLFA F

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MAFAASNLPS AEQQTGVIDD SLYRELWHAC AGPLVTLPRD GERVYYFPQG HMEQLEASMH  60
QGLEHQMPSF NLPSKILCKV ASVQLKAEPD TDEVYGQITL VPEADQSEVT SPDDPLPAPE  120
RCIVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMTQ QPPWQELVAT DLHGNEWHFR  180
HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRGANGE LRVGVRRLMR QQANMPSSVI  240
SSHSMHLGVL ATASHAIATR SMFSVFYKPR TSRSEFIVSV NKYLEARNSK LSVGMRFKMR  300
FEGEEVPERR FSGTIVGVGD NKSTGWADSE WRSLKVQWDE PSSILRPDRV SPWELELLVA  360
TNTSSNSPPA QRNKRARPSV LPSSSSDLSS LVGMRKSPVE SSAFSYCEAQ RGQPSPKFSS  420
AGKPNSVSFS GNGSLAAASS NLTYWSNRVE SVRESFAPVV SKESYERKQG TGNGCRLFGI  480
QLLDNVNMEE NSPVATVSGT GGDDRPVPSL DADSDQHSDP SNLNRSDLPS ISCDPEKSCM  540
RSPQEWQSKQ IRSCTKVIQS HFFLFPNLFA F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.2	0.0	ARF family protein