PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721411.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 397aa MW: 45310.4 Da PI: 4.3725

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.8	2.1e-16	163	247	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L++a + + +r++l+ W+ev++k++e ++er+ +qC+++++ l+k+ykk+k + + t + s+++yf++++ XP_022721411.1 163 WTEHETFVLLDAWGDQFLQCGRKSLRSEEWQEVAEKVSEvSKIERTDTQCRNRLDTLKKKYKKEKVMLAE-TGATASNWVYFKKMD 247 ***********************************762678**********************9.577778******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MDEIEDDARY PSNAYGVSHQ QGYGSSNSQK LPVRNVPDSR RIGNQYVDDN EDEEEEADEE 60 DLAEEEENHY QNNGVRYVGK DIDDDDDNDD DDELDDDDDE GGDKQKGFNR KNDDADLERQ 120 PKKRKLKSLV SSYEFAPRVL APALAGPSVP RPSHGGRNSL TDWTEHETFV LLDAWGDQFL 180 QCGRKSLRSE EWQEVAEKVS EVSKIERTDT QCRNRLDTLK KKYKKEKVML AETGATASNW 240 VYFKKMDMLM STPPQQGGLS CGLDSGEYVL MNPTFYSSRA NGLDEMRDSP ANSESADGEE 300 DISDGLPPKK RKFGRQGHEG SSFRLLADSI HKFSDIYEKI ENSKRQQMLE LEKMRMDFHR 360 ELEMEKRQIM KRVQAEIAKM QQGDDEENDV SAENASG

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MDEIEDDARY PSNAYGVSHQ QGYGSSNSQK LPVRNVPDSR RIGNQYVDDN EDEEEEADEE  60
DLAEEEENHY QNNGVRYVGK DIDDDDDNDD DDELDDDDDE GGDKQKGFNR KNDDADLERQ  120
PKKRKLKSLV SSYEFAPRVL APALAGPSVP RPSHGGRNSL TDWTEHETFV LLDAWGDQFL  180
QCGRKSLRSE EWQEVAEKVS EVSKIERTDT QCRNRLDTLK KKYKKEKVML AETGATASNW  240
VYFKKMDMLM STPPQQGGLS CGLDSGEYVL MNPTFYSSRA NGLDEMRDSP ANSESADGEE  300
DISDGLPPKK RKFGRQGHEG SSFRLLADSI HKFSDIYEKI ENSKRQQMLE LEKMRMDFHR  360
ELEMEKRQIM KRVQAEIAKM QQGDDEENDV SAENASG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	5e-70	Trihelix family protein