PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721435.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 753aa MW: 83399.4 Da PI: 5.7595

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.2	2.1e-21	97	152	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t++q++e+e+lF+++++p++++r++L+k+lgL rqVk+WFqNrR++ k XP_022721435.1 97 RKKYHRHTADQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 152 7999************************************************9877 PP
2	START	233.9	4.2e-73	268	491	2	206
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 + ++a++e ++a+a+ep+Wv+s+ e++n+de++++f+ + + +s+ea+r++gvv+ +l++lv++++d++ qW+e+++ ka+t+ XP_022721435.1 268 IVNQAMEEMKQMATAGEPLWVRSVetgrEILNYDEYVKEFSVESSsngrpkRSIEASRETGVVFVDLPRLVQSFMDVN-QWKEMFPciisKAATV 361 567899********************************77666899**************************.************ PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 +vi++g ga+ lm+aelq+l+plvp R+++fvRy++ql+a++w+ivdvS+d+ +++ ++s+v+++++pSg++ie+ksngh+kvtwveh XP_022721435.1 362 DVICNGeapnknGAVLLMFAELQMLTPLVPtREVYFVRYCKQLSAEQWAIVDVSIDNVEENI-DASLVKCRKRPSGCIIEDKSNGHCKVTWVEHL 455 ********************************************************98.9*************************** PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206 +++++++h l+r +v+sgla+ga++w+atlq qce+ XP_022721435.1 456 ECQKSTVHTLYRTVVNSGLAFGARHWMATLQLQCER 491 ********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
MGVDMSNPPT KDFFASPALS LSLAGIFRDA GAAAAAAAAS MEVEEGDEVS GGGSGKREET 60 VEISSENSGP ARSRSEDDLL EHDDDEDDGD KTKKKKRKKY HRHTADQIRE MEALFKESPH 120 PDEKQRQQLS KQLGLAPRQV KFWFQNRRTQ IKAIQERHEN SLFKQELEKL RDENKAMRET 180 INKACCPNCG MATTSKDGSM TTEEQQLRIE NAKLKAEVEK LRTVIGKYPP GAASTSSCSA 240 GNDDQENRSS LDFYTGIFGL EKSRIMEIVN QAMEEMKQMA TAGEPLWVRS VETGREILNY 300 DEYVKEFSVE SSSNGRPKRS IEASRETGVV FVDLPRLVQS FMDVNQWKEM FPCIISKAAT 360 VDVICNGEAP NKNGAVLLMF AELQMLTPLV PTREVYFVRY CKQLSAEQWA IVDVSIDNVE 420 ENIDASLVKC RKRPSGCIIE DKSNGHCKVT WVEHLECQKS TVHTLYRTVV NSGLAFGARH 480 WMATLQLQCE RFVFFMATNV PTKDSTGVAT LAGRKSILKL AQRMTFSFCH SIGASSYHTW 540 NKVTSKTGED IRVSSRKNLS DPGEPLGVIV CAVSSVWLPV SPNLLFDFLR DEARRNEWDI 600 ISNGGPVQSV ANLAKGQDRG NAVTIQTMKS KENSMWVLQD SCTNAFESMV VFAPVDITGM 660 QSVITGCDSS SMAILPSGFS ILPDGLESRP LVITSRHEKS NDTEGGSLLT IAFQILTNSS 720 PTAKLTMESV ESVNTIISCT LRNIKTSLQC EDG

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

MGVDMSNPPT KDFFASPALS LSLAGIFRDA GAAAAAAAAS MEVEEGDEVS GGGSGKREET  60
VEISSENSGP ARSRSEDDLL EHDDDEDDGD KTKKKKRKKY HRHTADQIRE MEALFKESPH  120
PDEKQRQQLS KQLGLAPRQV KFWFQNRRTQ IKAIQERHEN SLFKQELEKL RDENKAMRET  180
INKACCPNCG MATTSKDGSM TTEEQQLRIE NAKLKAEVEK LRTVIGKYPP GAASTSSCSA  240
GNDDQENRSS LDFYTGIFGL EKSRIMEIVN QAMEEMKQMA TAGEPLWVRS VETGREILNY  300
DEYVKEFSVE SSSNGRPKRS IEASRETGVV FVDLPRLVQS FMDVNQWKEM FPCIISKAAT  360
VDVICNGEAP NKNGAVLLMF AELQMLTPLV PTREVYFVRY CKQLSAEQWA IVDVSIDNVE  420
ENIDASLVKC RKRPSGCIIE DKSNGHCKVT WVEHLECQKS TVHTLYRTVV NSGLAFGARH  480
WMATLQLQCE RFVFFMATNV PTKDSTGVAT LAGRKSILKL AQRMTFSFCH SIGASSYHTW  540
NKVTSKTGED IRVSSRKNLS DPGEPLGVIV CAVSSVWLPV SPNLLFDFLR DEARRNEWDI  600
ISNGGPVQSV ANLAKGQDRG NAVTIQTMKS KENSMWVLQD SCTNAFESMV VFAPVDITGM  660
QSVITGCDSS SMAILPSGFS ILPDGLESRP LVITSRHEKS NDTEGGSLLT IAFQILTNSS  720
PTAKLTMESV ESVNTIISCT LRNIKTSLQC EDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	98	KKKKRK
2	93	99	KKKKRKK
3	95	99	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79840.1	0.0	HD-ZIP family protein