PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721585.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 559aa MW: 61671.8 Da PI: 9.0858

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.4	3.7e-09	444	492	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_022721585.1 444 AWTLSEVMKLVEGVSKYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 492 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MVEGDGRLVP ATDDELMEVE GLLENEKCET QIVADTGHVL GCTSNEVSSP GMPQLGSSEG 60 LSHSEITEAD TEKLSARIEE MVPSRTQCSS DNHVTQSWSV GEHSKRLVGS IEGGSSSSVG 120 CISSKPDFSK LKDEICLDNL SIKELHEVFK ATFGRDTTVK DKQWLKRRIA MGLTNFCDVS 180 TATFVIKDNK LVKKGKEDSC NNVNLSTGIE LPAVGVEYHE DLLNSHSHQI DEHQTTSGMR 240 SGNNGVEDNC GSEPLAADQR AAKRVRRPTK RYIEELSEAE YKEYRGRLIS STKNIEIRPL 300 ASKSHARPAR NVSLEGRTVM MRLDSFGGSG IQVPCVYRVR RSQPRKNVMA LLKFHPSGIG 360 RTATLVRKCL DVHGSQMDNG SVNKVLKTKS APEQTPQQYV AESKKERPSA ELGQNMGLKQ 420 DTSDGNVVTV RTAKGGIRRK HHRAWTLSEV MKLVEGVSKY GAGRWSEIKR LAFASYSYRT 480 SVDLKDKWRN LLKASFAWTP VDKGVNSRKH PAMPIPAPIL LRVRELAEMH SQVPPPSHCA 540 SKQAACGGRS VYETRPGYS

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MVEGDGRLVP ATDDELMEVE GLLENEKCET QIVADTGHVL GCTSNEVSSP GMPQLGSSEG  60
LSHSEITEAD TEKLSARIEE MVPSRTQCSS DNHVTQSWSV GEHSKRLVGS IEGGSSSSVG  120
CISSKPDFSK LKDEICLDNL SIKELHEVFK ATFGRDTTVK DKQWLKRRIA MGLTNFCDVS  180
TATFVIKDNK LVKKGKEDSC NNVNLSTGIE LPAVGVEYHE DLLNSHSHQI DEHQTTSGMR  240
SGNNGVEDNC GSEPLAADQR AAKRVRRPTK RYIEELSEAE YKEYRGRLIS STKNIEIRPL  300
ASKSHARPAR NVSLEGRTVM MRLDSFGGSG IQVPCVYRVR RSQPRKNVMA LLKFHPSGIG  360
RTATLVRKCL DVHGSQMDNG SVNKVLKTKS APEQTPQQYV AESKKERPSA ELGQNMGLKQ  420
DTSDGNVVTV RTAKGGIRRK HHRAWTLSEV MKLVEGVSKY GAGRWSEIKR LAFASYSYRT  480
SVDLKDKWRN LLKASFAWTP VDKGVNSRKH PAMPIPAPIL LRVRELAEMH SQVPPPSHCA  540
SKQAACGGRS VYETRPGYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-116	MYB_related family protein