PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721586.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 481aa MW: 53446.8 Da PI: 10.2486

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.7	3e-09	366	414	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_022721586.1 366 AWTLSEVMKLVEGVSKYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 414 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MEMVPSRTQC SSDNHVTQSW SVGEHSKRLV GSIEGGSSSS VGCISSKPDF SKLKDEICLD 60 NLSIKELHEV FKATFGRDTT VKDKQWLKRR IAMGLTNFCD VSTATFVIKD NKLVKKGKED 120 SCNNVNLSTG IELPAVGVEY HEDLLNSHSH QIDEHQTTSG MRSGNNGVED NCGSEPLAAD 180 QRAAKRVRRP TKRYIEELSE AEYKEYRGRL ISSTKNIEIR PLASKSHARP ARNVSLEGRT 240 VMMRLDSFGG SGIQVPCVYR VRRSQPRKNV MALLKFHPSG IGRTATLVRK CLDVHGSQMD 300 NGSVNKVLKT KSAPEQTPQQ YVAESKKERP SAELGQNMGL KQDTSDGNVV TVRTAKGGIR 360 RKHHRAWTLS EVMKLVEGVS KYGAGRWSEI KRLAFASYSY RTSVDLKDKW RNLLKASFAW 420 TPVDKGVNSR KHPAMPIPAP ILLRVRELAE MHSQVPPPSH CASKQAACGG RSVYETRPGY 480 S

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MEMVPSRTQC SSDNHVTQSW SVGEHSKRLV GSIEGGSSSS VGCISSKPDF SKLKDEICLD  60
NLSIKELHEV FKATFGRDTT VKDKQWLKRR IAMGLTNFCD VSTATFVIKD NKLVKKGKED  120
SCNNVNLSTG IELPAVGVEY HEDLLNSHSH QIDEHQTTSG MRSGNNGVED NCGSEPLAAD  180
QRAAKRVRRP TKRYIEELSE AEYKEYRGRL ISSTKNIEIR PLASKSHARP ARNVSLEGRT  240
VMMRLDSFGG SGIQVPCVYR VRRSQPRKNV MALLKFHPSG IGRTATLVRK CLDVHGSQMD  300
NGSVNKVLKT KSAPEQTPQQ YVAESKKERP SAELGQNMGL KQDTSDGNVV TVRTAKGGIR  360
RKHHRAWTLS EVMKLVEGVS KYGAGRWSEI KRLAFASYSY RTSVDLKDKW RNLLKASFAW  420
TPVDKGVNSR KHPAMPIPAP ILLRVRELAE MHSQVPPPSH CASKQAACGG RSVYETRPGY  480
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-111	MYB_related family protein