PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022721589.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 554aa    MW: 61601.6 Da    PI: 6.0116
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022721589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS265.81.4e-811715462374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL  cA+a+++g+l+++q+lL  l+elas++gd+++Rla + ++AL ++l++s+ ++     p + ++++ +    +l  f+evsP++ f + 
  XP_022721589.1 171 EQLLNPCATAITAGNLTRVQHLLYVLNELASSTGDANHRLADHGLRALTHHLSSSSAST----GPVTFASTEPKFFQRSLLKFYEVSPWFAFPNN 261
                     689**************************************************933333....3444443445555556666************* PP

            GRAS  97 taNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.........skeeleetgerLakfAeelgvpfe 177
                     +aN  Il+ +++e    + +Hi+D+++s+G+QWp+Ll+aL+ R+ ++pp +RiT+v++ +++              +   +rL +fA++++++++
  XP_022721589.1 262 IANASILQILAQEpdktRNLHILDIGVSHGVQWPTLLEALTRRSgGPPPLVRITVVAATAENnqiidtpfcIGPPGHDFYSRLPSFANSMNINLQ 356
                     ***********999887889************************55666********977778899998888889999***************** PP

            GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfd 269
                     +n l  + l++l+ ++++ +pgE+l+V+ +++lh+l    ++++++r+e+Lk+++sl+Pk v+++e++  +++ n ++F+++f++ +e  + ++d
  XP_022721589.1 357 INRLENHPLQNLTAQTIDNSPGETLIVCAQFRLHHLN---HKTPDQRTEFLKVLRSLEPKGVILSENNteCSCsNCGDFATGFSRRVESLWRFLD 448
                     ***9999*****************************8...77777788******************98445667889****************** PP

            GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWk 363
                     s+++ +    + r + Er++++ e+ ++++++ ++    +e +ekW er++ aGF   +++e+a + a++llrk++ ++++r ee++g++ l Wk
  XP_022721589.1 449 STSSAF----KGRESEERRVMEGEAAKALTNQAEM----NEGKEKWCERMRGAGFVGETFGEDAIDGARALLRKYDsNWEMRAEEKEGCVGLWWK 535
                     **7775....6666667777777789999888887....999**********************************9999*************** PP

            GRAS 364 drpLvsvSaWr 374
                     ++p+ ++S W+
  XP_022721589.1 536 GQPVSFCSLWK 546
                     **********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    
MRLEEAEPNP TPDHILDWLE DSVSFLPSFL DDPYNSGHIN SYQWWDQNED IGQDLINIGA  60
TATSVNSPAI VAAENTINSG LVESNSTISN PPLPSNSCKR RKPYDDLVPR TSQTQQHKRN  120
QSSKINENED GKAVVEEVVA NKRSTGNKKN SNKSSGNNCN NSNNKEGRWA EQLLNPCATA  180
ITAGNLTRVQ HLLYVLNELA SSTGDANHRL ADHGLRALTH HLSSSSASTG PVTFASTEPK  240
FFQRSLLKFY EVSPWFAFPN NIANASILQI LAQEPDKTRN LHILDIGVSH GVQWPTLLEA  300
LTRRSGGPPP LVRITVVAAT AENNQIIDTP FCIGPPGHDF YSRLPSFANS MNINLQINRL  360
ENHPLQNLTA QTIDNSPGET LIVCAQFRLH HLNHKTPDQR TEFLKVLRSL EPKGVILSEN  420
NTECSCSNCG DFATGFSRRV ESLWRFLDST SSAFKGRESE ERRVMEGEAA KALTNQAEMN  480
EGKEKWCERM RGAGFVGETF GEDAIDGARA LLRKYDSNWE MRAEEKEGCV GLWWKGQPVS  540
FCSLWKLSSK DEES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-172GRAS family protein