PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721755.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 382aa MW: 42843.6 Da PI: 5.7061

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.4	1.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT++Ede+l+++++ G g+Wk+ ++ g+ R++k+c++rw +yl XP_022721755.1 14 RGRWTADEDEILKNYIQVNGEGSWKSLPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	51.1	3.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E+e +v+++ +G++ W++Ia+ ++ gRt++++k++w+++l XP_022721755.1 67 RGNITAQEEETIVKLHSTFGNR-WSLIAAQLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MGRSPCCEKV GLKRGRWTAD EDEILKNYIQ VNGEGSWKSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI TAQEEETIVK LHSTFGNRWS LIAAQLPGRT DNEIKNYWNS HLRRKIYSFT 120 KTLKDHTEPS DIDAVTRAGD QCKRRGGRTS RSAMKRHKLA LMSLGIPKTV APHEVLRDPA 180 AQENTPLGQT QDSKDPDSAV LEGRSNLGMH GSCMHSSARL AGNYDERQST GIALISGKER 240 SSTAAEMYGC SVRETEEVLG PYEWLDNEIK RLSSILQNER VDTNGNHGLI TNGENGVRVI 300 ITDEDTTNGV QNCAKNYDQE RESSGILSSN ADQIPAGELQ VCNYLSPGNP GFDEEWLDWE 360 YSGLAFQWDD DQYWGLWDDS DI

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MGRSPCCEKV GLKRGRWTAD EDEILKNYIQ VNGEGSWKSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI TAQEEETIVK LHSTFGNRWS LIAAQLPGRT DNEIKNYWNS HLRRKIYSFT  120
KTLKDHTEPS DIDAVTRAGD QCKRRGGRTS RSAMKRHKLA LMSLGIPKTV APHEVLRDPA  180
AQENTPLGQT QDSKDPDSAV LEGRSNLGMH GSCMHSSARL AGNYDERQST GIALISGKER  240
SSTAAEMYGC SVRETEEVLG PYEWLDNEIK RLSSILQNER VDTNGNHGLI TNGENGVRVI  300
ITDEDTTNGV QNCAKNYDQE RESSGILSSN ADQIPAGELQ VCNYLSPGNP GFDEEWLDWE  360
YSGLAFQWDD DQYWGLWDDS DI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	3e-80	MYB family protein