PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721858.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 796aa MW: 89394.7 Da PI: 5.951

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721858.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	112.9	1.8e-35	138	214	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gCead+se+k yhrrh+vC ++k+++vl++g+++r+CqqC++fh ls fDe+krsCr +L++hn rrk++ XP_022721858.1 138 RCQVPGCEADISELKGYHRRHRVCLPCAKSSSVLIDGETKRYCQQCGKFHLLSYFDEGKRSCRWKLEHHNIIRRKNS 214 6************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
MEQAPSPPSL TPIEAYRSED TEMDVQIPVT EADPTSSVWD WGDLLDFAID DDFSISFDDE 60 NLSPSPLEAQ APDTGPVPGP DRVRKRDPRM TCSNFLAGRV PCACPEIDEQ IEKLEEEEAG 120 APGNKRARTG RIGLGTYRCQ VPGCEADISE LKGYHRRHRV CLPCAKSSSV LIDGETKRYC 180 QQCGKFHLLS YFDEGKRSCR WKLEHHNIIR RKNSVGSKTA VNKKSQAAVQ IEDIACDGGA 240 GKDDLSLSGQ IAEEQPSFES ENGTHCSVPM LQSVNNDNIV TLNDTETDGG KDQSKFSIST 300 SYLDNKTAYS SMCPTGRISF KLYDWNPAEF PRRLRHQIFQ WLANMPVELE GYIRPGCTIL 360 TVFISMPKNM WMKLSENPMT YMHDFVVTPG RMLYGRGFMT IYLNNMIFQT RKDGTSMVKI 420 NAEVQAPRLH YVHPSCFEAG KPMEFVACGS NLLQPKFRFL VSFAGKYLPY DYCVATTHVQ 480 SKEDSPSCGH RLYKIYVPQT DPNLFGPAFI EVENQSGLSN FIPVLIGDKE VCSEMKSIQQ 540 RFDVSFFQEG SKIPSSGSMF EACEASTLRQ RAYSELLLDI AWLLGEPKLE NFQEIVASSQ 600 IQRFNCLLSF LIQNESTVIL KKVLLTLKIV VDKTGFNGAN DSDIRLLRKY MNYARDILGN 660 KHQKGAGPVL LSEYIEQERN LYSQSSFTND ELSVVPNVSQ DSEERTNGKL QTTMASTTFT 720 RNEEIIMNVN LSKECPRKSC SPIFATTTLR FRPAVFVIAT AAICLAMCAV FFHPNKVGEF 780 AVTIRRCLLN KVLDVE

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

MEQAPSPPSL TPIEAYRSED TEMDVQIPVT EADPTSSVWD WGDLLDFAID DDFSISFDDE  60
NLSPSPLEAQ APDTGPVPGP DRVRKRDPRM TCSNFLAGRV PCACPEIDEQ IEKLEEEEAG  120
APGNKRARTG RIGLGTYRCQ VPGCEADISE LKGYHRRHRV CLPCAKSSSV LIDGETKRYC  180
QQCGKFHLLS YFDEGKRSCR WKLEHHNIIR RKNSVGSKTA VNKKSQAAVQ IEDIACDGGA  240
GKDDLSLSGQ IAEEQPSFES ENGTHCSVPM LQSVNNDNIV TLNDTETDGG KDQSKFSIST  300
SYLDNKTAYS SMCPTGRISF KLYDWNPAEF PRRLRHQIFQ WLANMPVELE GYIRPGCTIL  360
TVFISMPKNM WMKLSENPMT YMHDFVVTPG RMLYGRGFMT IYLNNMIFQT RKDGTSMVKI  420
NAEVQAPRLH YVHPSCFEAG KPMEFVACGS NLLQPKFRFL VSFAGKYLPY DYCVATTHVQ  480
SKEDSPSCGH RLYKIYVPQT DPNLFGPAFI EVENQSGLSN FIPVLIGDKE VCSEMKSIQQ  540
RFDVSFFQEG SKIPSSGSMF EACEASTLRQ RAYSELLLDI AWLLGEPKLE NFQEIVASSQ  600
IQRFNCLLSF LIQNESTVIL KKVLLTLKIV VDKTGFNGAN DSDIRLLRKY MNYARDILGN  660
KHQKGAGPVL LSEYIEQERN LYSQSSFTND ELSVVPNVSQ DSEERTNGKL QTTMASTTFT  720
RNEEIIMNVN LSKECPRKSC SPIFATTTLR FRPAVFVIAT AAICLAMCAV FFHPNKVGEF  780
AVTIRRCLLN KVLDVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein