PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022721893.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 280aa    MW: 31905.9 Da    PI: 5.4627
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022721893.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.3e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd++l+ +++++G  +W++ +++ g+ R++k+c++rw +yl
   XP_022721893.1 14 KGPWTLEEDQILISYIQKYGHANWRALPKKAGLLRCGKSCRLRWVNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding53.65.1e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
   XP_022721893.1  67 RGNFTLEEEETIIKLHEMLGNR-WSAIAAKLP-GRTDNELKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MVRAPCCDEI GLKKGPWTLE EDQILISYIQ KYGHANWRAL PKKAGLLRCG KSCRLRWVNY  60
LRPDIKRGNF TLEEEETIIK LHEMLGNRWS AIAAKLPGRT DNELKNVWHT HLKKRLKQYQ  120
IKPVTKQNPK SKPKIKCESS DNISTIQSEP GNSSSIPGQT PMWPQPSSSE VSSITDVTTA  180
TSDREVNNKA MKAENMEYSW EYFPEIDESF WSDALSSDNS SAPVNFGGVS EEFQSQVPSS  240
SIDHVMEPDY GYSQNLDDAM EFWYNLFIKA GGEQELITEF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118LKKRLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.16e-92MYB family protein