PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721902.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 892aa MW: 98904.9 Da PI: 6.9033

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.9	1.9e-40	147	224	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C++dls+ak+yhrrh+vC++hska+++lv +++qrfCqqCsrfh l+efD++krsCrrrLa+hn+rrrk+++ XP_022721902.1 147 VCQVEDCRTDLSNAKDYHRRHRVCDMHSKASKALVGNVMQRFCQQCSRFHVLQEFDDGKRSCRRRLAGHNRRRRKTNP 224 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 892 aa Download sequence
MEAKFGGKPH QFYGPMVSDL KAVEKNSVEW DLNNWKWDGD LFTATPLNSV PSDCRSRQLC 60 AVEPEAPVTA GPPHGSSSCS EHNNLGYEKG KRESQKRRIE VVDDDEVNRD AAALNLTLGG 120 QVYPIMNDEA KCGKKPKVTG TTSSHAVCQV EDCRTDLSNA KDYHRRHRVC DMHSKASKAL 180 VGNVMQRFCQ QCSRFHVLQE FDDGKRSCRR RLAGHNRRRR KTNPDNERSS SYLLISLLRI 240 LSNMHSNNSD QTKDQDLLSQ LLRSLASLTG STIGRNISGL PQGSQGVVNA GASLGNLEKV 300 TDVVSNGTER ATPSGSASKI DGCANVPDRQ GPMGHCGTLP ASDLAQKRAN DDVQDGSLSD 360 SPSKILIPSG ASFPFRANEP EATVGRIRMN NIDLNNVYND SQDYVDNLER ALVLKNPVNG 420 SLHSSVCLSE SHKSSPHQQS GNSDSTSGQS PCTSSGEAQS CTNRIVFKLF GKDPNNFPIA 480 LRRQILDWLS HSPTDIESYI RPGCIILTIY LRLGESAWEE LFCDLGSSLR RLVDMSNDSF 540 WKTGWVYARV QHSVAFIYNG RVLLDTTLPL KSDKNCRISS IKPIAVSVTE GAQFLVKGFN 600 LNQSGTRLLC AIEGKYLVQE SCCNLMEVVD PVNEHDELQY LSFHCSIPNV SGRGFIEVEG 660 HGLSSTFFPF IVAEQEVCSE ICTLEGVIET AVPTVDINKD VEKMETKNQA LDFIHEMGWL 720 LHRNHLSWRL GHLNPNSYLF PFRRFKWLME FSMDHDWCAV VKKLLGILFD GTIDLRDHSS 780 IEFALLDMCL LHRAVQRNCR PMVELLLRYV PDKVLDKSGS EKPKVDGNNY GFMFKPNVAG 840 PAGLTPLHVA ASRGGSENVL DALTEDPGSI QLFLAFWCKI VLITPFGLLF CC

Sequence ? help Back to Top

Protein Sequence Length: 892 aa Download sequence

MEAKFGGKPH QFYGPMVSDL KAVEKNSVEW DLNNWKWDGD LFTATPLNSV PSDCRSRQLC  60
AVEPEAPVTA GPPHGSSSCS EHNNLGYEKG KRESQKRRIE VVDDDEVNRD AAALNLTLGG  120
QVYPIMNDEA KCGKKPKVTG TTSSHAVCQV EDCRTDLSNA KDYHRRHRVC DMHSKASKAL  180
VGNVMQRFCQ QCSRFHVLQE FDDGKRSCRR RLAGHNRRRR KTNPDNERSS SYLLISLLRI  240
LSNMHSNNSD QTKDQDLLSQ LLRSLASLTG STIGRNISGL PQGSQGVVNA GASLGNLEKV  300
TDVVSNGTER ATPSGSASKI DGCANVPDRQ GPMGHCGTLP ASDLAQKRAN DDVQDGSLSD  360
SPSKILIPSG ASFPFRANEP EATVGRIRMN NIDLNNVYND SQDYVDNLER ALVLKNPVNG  420
SLHSSVCLSE SHKSSPHQQS GNSDSTSGQS PCTSSGEAQS CTNRIVFKLF GKDPNNFPIA  480
LRRQILDWLS HSPTDIESYI RPGCIILTIY LRLGESAWEE LFCDLGSSLR RLVDMSNDSF  540
WKTGWVYARV QHSVAFIYNG RVLLDTTLPL KSDKNCRISS IKPIAVSVTE GAQFLVKGFN  600
LNQSGTRLLC AIEGKYLVQE SCCNLMEVVD PVNEHDELQY LSFHCSIPNV SGRGFIEVEG  660
HGLSSTFFPF IVAEQEVCSE ICTLEGVIET AVPTVDINKD VEKMETKNQA LDFIHEMGWL  720
LHRNHLSWRL GHLNPNSYLF PFRRFKWLME FSMDHDWCAV VKKLLGILFD GTIDLRDHSS  780
IEFALLDMCL LHRAVQRNCR PMVELLLRYV PDKVLDKSGS EKPKVDGNNY GFMFKPNVAG  840
PAGLTPLHVA ASRGGSENVL DALTEDPGSI QLFLAFWCKI VLITPFGLLF CC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein