PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721903.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 829aa MW: 92022.6 Da PI: 7.7716

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	47.3	5.4e-15	2	33	47	78
SSEEETTT--SS--S-STTTT-------S--- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78 +rfh l+efD++krsCrrrLa+hn+rrrk+++ XP_022721903.1 2 GRFHVLQEFDDGKRSCRRRLAGHNRRRRKTNP 33 79***************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 829 aa Download sequence
MGRFHVLQEF DDGKRSCRRR LAGHNRRRRK TNPDNERSSS YLLISLLRIL SNMHSNNSDQ 60 TKDQDLLSQL LRSLASLTGS TIGRNISGLP QGSQGVVNAG ASLGNLEKVT DVVSNGTERA 120 TPSGSASKID GCANVPDRQG PMGHCGTLPA SDLAQKRAND DVQDGSLSDS PSKILIPSGA 180 SFPFRANEPE ATVGRIRMNN IDLNNVYNDS QDYVDNLERA LVLKNPVNGS LHSSVCLSES 240 HKSSPHQQSG NSDSTSGQSP CTSSGEAQSC TNRIVFKLFG KDPNNFPIAL RRQILDWLSH 300 SPTDIESYIR PGCIILTIYL RLGESAWEEL FCDLGSSLRR LVDMSNDSFW KTGWVYARVQ 360 HSVAFIYNGR VLLDTTLPLK SDKNCRISSI KPIAVSVTEG AQFLVKGFNL NQSGTRLLCA 420 IEGKYLVQES CCNLMEVVDP VNEHDELQYL SFHCSIPNVS GRGFIEVEGH GLSSTFFPFI 480 VAEQEVCSEI CTLEGVIETA VPTVDINKDV EKMETKNQAL DFIHEMGWLL HRNHLSWRLG 540 HLNPNSYLFP FRRFKWLMEF SMDHDWCAVV KKLLGILFDG TIDLRDHSSI EFALLDMCLL 600 HRAVQRNCRP MVELLLRYVP DKVLDKSGSE KPKVDGNNYG FMFKPNVAGP AGLTPLHVAA 660 SRGGSENVLD ALTEDPGSAA IEAWRSARDS TGLTPNDYAC LRGHYSYIHL VQRKINKKSE 720 CGHVVLDIPR TMLDSNSKQK LSDGTRLEKA ASLETENIKM KTRRQCCKAC EQKLANRNSR 780 TSPVYRPAML SMVAIAAVCV CMALLFKSSP EVLDVSRPFR WELLKYGSS

Sequence ? help Back to Top

Protein Sequence Length: 829 aa Download sequence

MGRFHVLQEF DDGKRSCRRR LAGHNRRRRK TNPDNERSSS YLLISLLRIL SNMHSNNSDQ  60
TKDQDLLSQL LRSLASLTGS TIGRNISGLP QGSQGVVNAG ASLGNLEKVT DVVSNGTERA  120
TPSGSASKID GCANVPDRQG PMGHCGTLPA SDLAQKRAND DVQDGSLSDS PSKILIPSGA  180
SFPFRANEPE ATVGRIRMNN IDLNNVYNDS QDYVDNLERA LVLKNPVNGS LHSSVCLSES  240
HKSSPHQQSG NSDSTSGQSP CTSSGEAQSC TNRIVFKLFG KDPNNFPIAL RRQILDWLSH  300
SPTDIESYIR PGCIILTIYL RLGESAWEEL FCDLGSSLRR LVDMSNDSFW KTGWVYARVQ  360
HSVAFIYNGR VLLDTTLPLK SDKNCRISSI KPIAVSVTEG AQFLVKGFNL NQSGTRLLCA  420
IEGKYLVQES CCNLMEVVDP VNEHDELQYL SFHCSIPNVS GRGFIEVEGH GLSSTFFPFI  480
VAEQEVCSEI CTLEGVIETA VPTVDINKDV EKMETKNQAL DFIHEMGWLL HRNHLSWRLG  540
HLNPNSYLFP FRRFKWLMEF SMDHDWCAVV KKLLGILFDG TIDLRDHSSI EFALLDMCLL  600
HRAVQRNCRP MVELLLRYVP DKVLDKSGSE KPKVDGNNYG FMFKPNVAGP AGLTPLHVAA  660
SRGGSENVLD ALTEDPGSAA IEAWRSARDS TGLTPNDYAC LRGHYSYIHL VQRKINKKSE  720
CGHVVLDIPR TMLDSNSKQK LSDGTRLEKA ASLETENIKM KTRRQCCKAC EQKLANRNSR  780
TSPVYRPAML SMVAIAAVCV CMALLFKSSP EVLDVSRPFR WELLKYGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein