PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722129.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRAS

Protein Properties

Length: 1085aa MW: 124343 Da PI: 6.2086

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	129.4	4.1e-40	8	350	4	374
GRAS 4 lLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl. 96 +Ll+cA+av++gdl+la++lL+++ +la+ + + +++yf+eAL +r ++ l+p +a++k +++P l +++ XP_022722129.1 8 VLLDCARAVEDGDLKLADSLLEQIWTLAADEPdKQQSMVVKYFAEALVRRAYG--------LHP----------DFAYFK--LQMTPPLHLQYWd 82 699**********************8887735667899********9........222..........222222..3778888777754 PP GRAS 97 .taNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfe.fnvl 181 +aN+ I +a+++ +rvH iDf is+ L++ ++ ++ s+R+ ++ +p+ ++ +++e ++ +++ ++ + ++e +v+ XP_022722129.1 83 gIANESIGDAINNTvmgkKRVHLIDFRISNLYYTEDLFDLVTDAYadalDDLISVRVSVILPPSLKKIINVQEEKDYITEAVTRYKFKLEkLEVV 177 468877766666555555*******988888888766654434447788****************************9999747888 PP GRAS 182 vakrledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274 +a++le++ ++L++++ +Ea++V ++l ll++ + le L +++++P++v++ e a+hn+++F +rf +++++ys +f XP_022722129.1 178 YANSLEEVGESMLDFRRteDEAVVVFYFFKLSMLLRQAGILER----ELLKLRNINPDLVIIKEYAANHNHSDFIRRFEDSFQHYSHVFG----- 263 999********9999************99999998....55568********************************94..... PP GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369 r+++e++k E+ +l+r+i n+v ceg++r+ rh tl +Wr+ le+ GF p pl+ +q++ l r + e++g+lv + p+++ XP_022722129.1 264 --RDNKEDNK-EENCLRRHINNIVGCEGRDRIVRHHTLDQWRSHLETNGFFPFPLKL---DQISGLSRCYR-------EDNGCLVRIQDNCPIYF 345 ..56666666.5667**************************************85...55555544444.......68899998888899999 PP GRAS 370 vSaWr 374 +SaW+ XP_022722129.1 346 ISAWK 350 99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1085 aa Download sequence
MASSAFPVLL DCARAVEDGD LKLADSLLEQ IWTLAADEPD KQQSMVVKYF AEALVRRAYG 60 LHPDFAYFKL QMTPPLHLQY WDGIANESIG DAINNTVMGK KRVHLIDFRI SNLYYTEDLF 120 DLVTDAYADA LDDLISVRVS VILPPSLKKI INVQEEKDYI TEAVTRYKFK LEKLEVVYAN 180 SLEEVGESML DFRRTEDEAV VVFYFFKLSM LLRQAGILER ELLKLRNINP DLVIIKEYAA 240 NHNHSDFIRR FEDSFQHYSH VFGRDNKEDN KEENCLRRHI NNIVGCEGRD RIVRHHTLDQ 300 WRSHLETNGF FPFPLKLDQI SGLSRCYRED NGCLVRIQDN CPIYFISAWK LKDGEHHFNP 360 IGNNFVQGCN PSPRLEDKVQ PLQPFPEGFK LNQLAALAEI HDMLQELCSE NKIELALTWT 420 YEDNMNEIWL DPYEKRTLIF QSTFCYFDDH EDPSLIGRNE VLQLLQGFAR KALQSSEHFL 480 VKPSISEFMK LYHPKSVKWF CIADCAAAAI CLQNRYTTDD VYVVAFLWRP CKTRPEKAES 540 LALRIFNSLK NMKTRFVKVR VQDTEIGSQE GAISNIPQVT VPMINPPPAS STTDFIYSNT 600 RDGHVMVTKG LNEQRGVIPN FHPPLPMHAS TTAGTGGVVL QTPGPHEPGN GKQTSFEPIA 660 NNENEIVKAN VNNLLISNAK RRKLTSDVWK EFSWKQDGDG KELATCVDCG TKFDGSSKKG 720 TTHLRNHLQR CKKRAAKVGR GDLKNESVSE GNSSFDQDRS RMDVARMIIK NQFPLKIVED 780 EFFTNTLKNL QPMFKLQSQE ALSFDIIHVY KEKKHKLFQY FDKLSCRFNL TISLWAHDPE 840 KIVDNSGEKN VENSIDGAIK TSNACLWDIF GIYKKLSQQD GRGYPLMNVK FDNNCRTCSL 900 VLAIAAVLDP QFRFDVLEFS YKAIYGYGDA KIHLRMIRDT LTDIFDEYAR IMSNEALFSN 960 DNNSSTLLNT EENTKESFHR WYNSKRNTEA SSISELDMYL RQPITISSNL DLDILGWWCE 1020 QASSFPILAR MVRDILAIPM SSIISGSTFH EKVMMDNPIF SGLDPQIIEA MICGRDWLGS 1080 PEESK

Sequence ? help Back to Top

Protein Sequence Length: 1085 aa Download sequence

MASSAFPVLL DCARAVEDGD LKLADSLLEQ IWTLAADEPD KQQSMVVKYF AEALVRRAYG  60
LHPDFAYFKL QMTPPLHLQY WDGIANESIG DAINNTVMGK KRVHLIDFRI SNLYYTEDLF  120
DLVTDAYADA LDDLISVRVS VILPPSLKKI INVQEEKDYI TEAVTRYKFK LEKLEVVYAN  180
SLEEVGESML DFRRTEDEAV VVFYFFKLSM LLRQAGILER ELLKLRNINP DLVIIKEYAA  240
NHNHSDFIRR FEDSFQHYSH VFGRDNKEDN KEENCLRRHI NNIVGCEGRD RIVRHHTLDQ  300
WRSHLETNGF FPFPLKLDQI SGLSRCYRED NGCLVRIQDN CPIYFISAWK LKDGEHHFNP  360
IGNNFVQGCN PSPRLEDKVQ PLQPFPEGFK LNQLAALAEI HDMLQELCSE NKIELALTWT  420
YEDNMNEIWL DPYEKRTLIF QSTFCYFDDH EDPSLIGRNE VLQLLQGFAR KALQSSEHFL  480
VKPSISEFMK LYHPKSVKWF CIADCAAAAI CLQNRYTTDD VYVVAFLWRP CKTRPEKAES  540
LALRIFNSLK NMKTRFVKVR VQDTEIGSQE GAISNIPQVT VPMINPPPAS STTDFIYSNT  600
RDGHVMVTKG LNEQRGVIPN FHPPLPMHAS TTAGTGGVVL QTPGPHEPGN GKQTSFEPIA  660
NNENEIVKAN VNNLLISNAK RRKLTSDVWK EFSWKQDGDG KELATCVDCG TKFDGSSKKG  720
TTHLRNHLQR CKKRAAKVGR GDLKNESVSE GNSSFDQDRS RMDVARMIIK NQFPLKIVED  780
EFFTNTLKNL QPMFKLQSQE ALSFDIIHVY KEKKHKLFQY FDKLSCRFNL TISLWAHDPE  840
KIVDNSGEKN VENSIDGAIK TSNACLWDIF GIYKKLSQQD GRGYPLMNVK FDNNCRTCSL  900
VLAIAAVLDP QFRFDVLEFS YKAIYGYGDA KIHLRMIRDT LTDIFDEYAR IMSNEALFSN  960
DNNSSTLLNT EENTKESFHR WYNSKRNTEA SSISELDMYL RQPITISSNL DLDILGWWCE  1020
QASSFPILAR MVRDILAIPM SSIISGSTFH EKVMMDNPIF SGLDPQIIEA MICGRDWLGS  1080
PEESK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01570.1	4e-40	GRAS family protein