PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022722131.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 257aa    MW: 30003.8 Da    PI: 6.6314
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022722131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS82.95.4e-2682494268
            GRAS   4 lLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +Ll+cA+a+++gdl+la++lL+++ +l   +  +    +++yf+eAL +r ++        l+p  ++     +  + l +++         ++ 
  XP_022722131.1   8 VLLDCARAIEDGDLKLADSLLKQIWTLTVYQPnEQQSNVVKYFAEALVRRAYG--------LHPDFDN--FKLQMGSPLDFLYW--------YIP 84 
                     69*************************76666488889***************........3333333..12333333444444........455 PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe.fnvlvakrledlel 191
                        aI +av g++rvH +Df i +   + +L+       ++  s+R+ ++ + + ++  +++e ++  +  A+  gv++e  +v++a++l++++ 
  XP_022722131.1  85 VEDAIKKAVVGKKRVHLVDFRIPH--LYGCLISPYL---ANLLSVRVSVILPRSLKKIVNVQEEQQYVTVQAKIYGVRLEkLEVVYANSLKEVDA 174
                     689*****************9965..5667775432...34568********9999***********************747888999******* PP

            GRAS 192 eeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                     ++L++++  +Ea++    ++l +ll e + +e    e+Lk +++++P++v++ e++a++n+++F +rf ++++yys +f
  XP_022722131.1 175 SMLDFRRteDEAVVFFYFFKLCTLLTEAGVMER---EMLK-LRDIKPDIVIIQEHDANYNHSDFITRFEDSFQYYSHVF 249
                     ******9999***************99999999...7776.7***********************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MVSSAFPVLL DCARAIEDGD LKLADSLLKQ IWTLTVYQPN EQQSNVVKYF AEALVRRAYG  60
LHPDFDNFKL QMGSPLDFLY WYIPVEDAIK KAVVGKKRVH LVDFRIPHLY GCLISPYLAN  120
LLSVRVSVIL PRSLKKIVNV QEEQQYVTVQ AKIYGVRLEK LEVVYANSLK EVDASMLDFR  180
RTEDEAVVFF YFFKLCTLLT EAGVMEREML KLRDIKPDIV IIQEHDANYN HSDFITRFED  240
SFQYYSHVFR LHLSYKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.16e-30GRAS family protein