PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022722280.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 234aa    MW: 27067.3 Da    PI: 4.5898
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022722280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS61.91.3e-1982334243
            GRAS   4 lLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl. 96 
                     +Ll+cA+av++gdl+l+++lL+++ +l   +  +    +++yf+eAL +r ++        l+p           +a++k   +++P l +++  
  XP_022722280.1   8 VLLDCARAVEDGDLKLVDSLLKQIWTLEPDEPdEQQSTVVKYFAEALVRRAYG--------LHPD----------FAYFK--LQMTPPLYLQYWd 82 
                     69*************************766663677789**************........2222..........22222..2556655554432 PP

            GRAS  97 .taNq....aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe.fnvlvakr 185
                      +aN+    aI + v g++rvH iDf i +      L++ L++  ++  s+R+ ++ +p+ ++  +++e ++ +++  ++ + ++e f+v++a++
  XP_022722280.1  83 gIANEyigdAINNTVMGKKRVHLIDFRIPHLNYTKGLFDLLTDAFDDLISVRVSVILPPSLKKFVNVQEEKDYITEAVAQYKFKLEkFEVVYANS 177
                     266661111555556666******************************************************************966******** PP

            GRAS 186 ledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvve 243
                     le++  ++L++++  +Ea++V   ++l  ll+e + le      L  +++++P++v++ e
  XP_022722280.1 178 LEEVGESMLDFRRteDEAVVVFYFFKLSMLLREAGILER----ELLKLRNINPDLVIIKE 233
                     ***********9999****************99999999....55568********9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MASSAFPVLL DCARAVEDGD LKLVDSLLKQ IWTLEPDEPD EQQSTVVKYF AEALVRRAYG  60
LHPDFAYFKL QMTPPLYLQY WDGIANEYIG DAINNTVMGK KRVHLIDFRI PHLNYTKGLF  120
DLLTDAFDDL ISVRVSVILP PSLKKFVNVQ EEKDYITEAV AQYKFKLEKF EVVYANSLEE  180
VGESMLDFRR TEDEAVVVFY FFKLSMLLRE AGILERELLK LRNINPDLVI IKEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.16e-19GRAS family protein