PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722366.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 235aa MW: 26962.9 Da PI: 10.2093

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.1	1.6e-08	86	130	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er+RR++ + +++ L ++lP +K++K +i++ A++ +++L XP_022722366.1 86 HMMNERKRREKQKRSYFDLHSMLPLG-----TKNDKNSIVQTAIKRVQEL 130 889*******************97.....7999999****999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MDQLIKQLLQ GETFWYETTP APPVGRSAFV PYANTPKIEL RLQSAAGCTN GVSSGNANKR 60 MIEFLRKSWL TTTETKDTQK ERSFHHMMNE RKRREKQKRS YFDLHSMLPL GTKNDKNSIV 120 QTAIKRVQEL EWLKKDLEGR NNELQATLAA MNENQHTEGT KIRVRIVNPK SGIDSMLAVL 180 KCLKQLGSKP RMIQSKFTNQ EFLAVIDIET EMGGAEVENA VNRTLQEAER KLQER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	95	ERKRRE
2	91	96	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	3e-49	bHLH family protein