PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722421.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1243aa MW: 138340 Da PI: 9.3019

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.8	1.4e-09	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a ++ R+ +++ XP_022722421.1 47 QWTKEELEHFYEAYRKYGKD-WKKVATMIR-DRSVEMV 82 6***************99.*******.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1243 aa Download sequence
MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY 60 RKYGKDWKKV ATMIRDRSVE MVEALYTMNR AYLSLPDGTA SVVGLIAMMT DHYCVMVSLW 120 YGIVDSTNGA WTHLGRGGSD SEQESNEGMG ASKRRPKRSR GKLRDQPSKS LYKPLPDLLH 180 FHSAASSYGC LSLLKRRRSE SRPRAVGKRT PRVPISFSHD KSKGERYFSP IRPGMKLKVD 240 AVDDNVAHVI ALALTEASQR GGSPQVSQTP NRKAETPSPV FNNERMNAES ETISAKILGS 300 EVDEDACELS LGSTEADNAD YSRAKNYSRN IEGTGTVEVQ QKGKRYYRRK PEVEESVNNH 360 LEDTKEACSG TEEGQRLCDL KGKFEAEVAD ANTSRASTKC LRKRSKKVLF GGVEETSFDA 420 LQTLADLSLM MPETAADTES SVLFKEEKNE VVEKTKPKGN HPVPGAKGTA SKQSKQGKLF 480 HHDVHAIPKA KEESHPNNVG MLKRRRKSSP YKLQIPKDET DADSQLGESP NVEASDEVKN 540 LVSKGKRSNN VAHTKQGKSV RPSECMSSSN IAHPKQGKSV RTPERTSASN VGHPKQGKSV 600 RPPERTSSST DHGRDLNTSA PSTIQVSSIH QVNLLKSRVK RKMDAQRPAI GKDIKPSDIV 660 KGKFSVPAML FHDRALNLKA KLCSFLSSYQ ARRWCAFEWF YSTIDYPWFA KREFVEYLDH 720 VGLGHVPRLT RVEWGVIRSS LGKPRRFSEQ FLKEEREKLN QYQESVRTHY ADLRAGIGEG 780 LPTDLARPLS VGQRVIAVHP KTREIHDGSV LIVDHSRYRI QFDSPELGVE FIMDIDCMPS 840 YPLENLPASL LRQNAAICKF AENYSELKMN GQPKESKIEE NMKFSQCDNP ENTDSSSRTS 900 PSTFNVGNLS QPVKVDSSSP NLQHKVGPME TVCTQQAVNS QPSAHALVQA READVEALSQ 960 LTRAIDKKEA VVSELRRMND EVLENQKGAD NCLKDSDSFK KQYAAVLLQL NEVNEQVSFA 1020 LFCLRQRNSY QANSSVKLLK PLAKIGGHGC QLSSFDHSMH HVQECVSNVA EIVESSRMKA 1080 RSMVNAAMQA MSSLRKGGKS IERIEDAIDF VNNQLSLDDF SLPALRSSTP LDSVHSTVTS 1140 HDLPTACVSY PSATSHIPDV KMQNFSDQDD LRIPSDIIVH CVATLLMTQK CTERQFPPGD 1200 VAQVLDSAVS SLKPYCSQNL QIYSEVQKCM GIIRNQILAL VPT

Sequence ? help Back to Top

Protein Sequence Length: 1243 aa Download sequence

MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY  60
RKYGKDWKKV ATMIRDRSVE MVEALYTMNR AYLSLPDGTA SVVGLIAMMT DHYCVMVSLW  120
YGIVDSTNGA WTHLGRGGSD SEQESNEGMG ASKRRPKRSR GKLRDQPSKS LYKPLPDLLH  180
FHSAASSYGC LSLLKRRRSE SRPRAVGKRT PRVPISFSHD KSKGERYFSP IRPGMKLKVD  240
AVDDNVAHVI ALALTEASQR GGSPQVSQTP NRKAETPSPV FNNERMNAES ETISAKILGS  300
EVDEDACELS LGSTEADNAD YSRAKNYSRN IEGTGTVEVQ QKGKRYYRRK PEVEESVNNH  360
LEDTKEACSG TEEGQRLCDL KGKFEAEVAD ANTSRASTKC LRKRSKKVLF GGVEETSFDA  420
LQTLADLSLM MPETAADTES SVLFKEEKNE VVEKTKPKGN HPVPGAKGTA SKQSKQGKLF  480
HHDVHAIPKA KEESHPNNVG MLKRRRKSSP YKLQIPKDET DADSQLGESP NVEASDEVKN  540
LVSKGKRSNN VAHTKQGKSV RPSECMSSSN IAHPKQGKSV RTPERTSASN VGHPKQGKSV  600
RPPERTSSST DHGRDLNTSA PSTIQVSSIH QVNLLKSRVK RKMDAQRPAI GKDIKPSDIV  660
KGKFSVPAML FHDRALNLKA KLCSFLSSYQ ARRWCAFEWF YSTIDYPWFA KREFVEYLDH  720
VGLGHVPRLT RVEWGVIRSS LGKPRRFSEQ FLKEEREKLN QYQESVRTHY ADLRAGIGEG  780
LPTDLARPLS VGQRVIAVHP KTREIHDGSV LIVDHSRYRI QFDSPELGVE FIMDIDCMPS  840
YPLENLPASL LRQNAAICKF AENYSELKMN GQPKESKIEE NMKFSQCDNP ENTDSSSRTS  900
PSTFNVGNLS QPVKVDSSSP NLQHKVGPME TVCTQQAVNS QPSAHALVQA READVEALSQ  960
LTRAIDKKEA VVSELRRMND EVLENQKGAD NCLKDSDSFK KQYAAVLLQL NEVNEQVSFA  1020
LFCLRQRNSY QANSSVKLLK PLAKIGGHGC QLSSFDHSMH HVQECVSNVA EIVESSRMKA  1080
RSMVNAAMQA MSSLRKGGKS IERIEDAIDF VNNQLSLDDF SLPALRSSTP LDSVHSTVTS  1140
HDLPTACVSY PSATSHIPDV KMQNFSDQDD LRIPSDIIVH CVATLLMTQK CTERQFPPGD  1200
VAQVLDSAVS SLKPYCSQNL QIYSEVQKCM GIIRNQILAL VPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	195	223	KRRRSESRPRAVGKRTPRVPISFSHDKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein