PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722422.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1230aa MW: 136956 Da PI: 9.3131

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.8	1.4e-09	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a ++ R+ +++ XP_022722422.1 47 QWTKEELEHFYEAYRKYGKD-WKKVATMIR-DRSVEMV 82 6***************99.*******.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1230 aa Download sequence
MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY 60 RKYGKDWKKV ATMIRDRSVE MVEALYTMNR KILPCFQAYL SLPDGTASVV GLIAMMTDHY 120 CVMGGSDSEQ ESNEGMGASK RRPKRSRGKL RDQPSKSLYK PLPDLLHFHS AASSYGCLSL 180 LKRRRSESRP RAVGKRTPRV PISFSHDKSK GERYFSPIRP GMKLKVDAVD DNVAHVIALA 240 LTEASQRGGS PQVSQTPNRK AETPSPVFNN ERMNAESETI SAKILGSEVD EDACELSLGS 300 TEADNADYSR AKNYSRNIEG TGTVEVQQKG KRYYRRKPEV EESVNNHLED TKEACSGTEE 360 GQRLCDLKGK FEAEVADANT SRASTKCLRK RSKKVLFGGV EETSFDALQT LADLSLMMPE 420 TAADTESSVL FKEEKNEVVE KTKPKGNHPV PGAKGTASKQ SKQGKLFHHD VHAIPKAKEE 480 SHPNNVGMLK RRRKSSPYKL QIPKDETDAD SQLGESPNVE ASDEVKNLVS KGKRSNNVAH 540 TKQGKSVRPS ECMSSSNIAH PKQGKSVRTP ERTSASNVGH PKQGKSVRPP ERTSSSTDHG 600 RDLNTSAPST IQVSSIHQVN LLKSRVKRKM DAQRPAIGKD IKPSDIVKGK FSVPAMLFHD 660 RALNLKAKLC SFLSSYQARR WCAFEWFYST IDYPWFAKRE FVEYLDHVGL GHVPRLTRVE 720 WGVIRSSLGK PRRFSEQFLK EEREKLNQYQ ESVRTHYADL RAGIGEGLPT DLARPLSVGQ 780 RVIAVHPKTR EIHDGSVLIV DHSRYRIQFD SPELGVEFIM DIDCMPSYPL ENLPASLLRQ 840 NAAICKFAEN YSELKMNGQP KESKIEENMK FSQCDNPENT DSSSRTSPST FNVGNLSQPV 900 KVDSSSPNLQ HKVGPMETVC TQQAVNSQPS AHALVQAREA DVEALSQLTR AIDKKEAVVS 960 ELRRMNDEVL ENQKGADNCL KDSDSFKKQY AAVLLQLNEV NEQVSFALFC LRQRNSYQAN 1020 SSVKLLKPLA KIGGHGCQLS SFDHSMHHVQ ECVSNVAEIV ESSRMKARSM VNAAMQAMSS 1080 LRKGGKSIER IEDAIDFVNN QLSLDDFSLP ALRSSTPLDS VHSTVTSHDL PTACVSYPSA 1140 TSHIPDVKMQ NFSDQDDLRI PSDIIVHCVA TLLMTQKCTE RQFPPGDVAQ VLDSAVSSLK 1200 PYCSQNLQIY SEVQKCMGII RNQILALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1230 aa Download sequence

MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY  60
RKYGKDWKKV ATMIRDRSVE MVEALYTMNR KILPCFQAYL SLPDGTASVV GLIAMMTDHY  120
CVMGGSDSEQ ESNEGMGASK RRPKRSRGKL RDQPSKSLYK PLPDLLHFHS AASSYGCLSL  180
LKRRRSESRP RAVGKRTPRV PISFSHDKSK GERYFSPIRP GMKLKVDAVD DNVAHVIALA  240
LTEASQRGGS PQVSQTPNRK AETPSPVFNN ERMNAESETI SAKILGSEVD EDACELSLGS  300
TEADNADYSR AKNYSRNIEG TGTVEVQQKG KRYYRRKPEV EESVNNHLED TKEACSGTEE  360
GQRLCDLKGK FEAEVADANT SRASTKCLRK RSKKVLFGGV EETSFDALQT LADLSLMMPE  420
TAADTESSVL FKEEKNEVVE KTKPKGNHPV PGAKGTASKQ SKQGKLFHHD VHAIPKAKEE  480
SHPNNVGMLK RRRKSSPYKL QIPKDETDAD SQLGESPNVE ASDEVKNLVS KGKRSNNVAH  540
TKQGKSVRPS ECMSSSNIAH PKQGKSVRTP ERTSASNVGH PKQGKSVRPP ERTSSSTDHG  600
RDLNTSAPST IQVSSIHQVN LLKSRVKRKM DAQRPAIGKD IKPSDIVKGK FSVPAMLFHD  660
RALNLKAKLC SFLSSYQARR WCAFEWFYST IDYPWFAKRE FVEYLDHVGL GHVPRLTRVE  720
WGVIRSSLGK PRRFSEQFLK EEREKLNQYQ ESVRTHYADL RAGIGEGLPT DLARPLSVGQ  780
RVIAVHPKTR EIHDGSVLIV DHSRYRIQFD SPELGVEFIM DIDCMPSYPL ENLPASLLRQ  840
NAAICKFAEN YSELKMNGQP KESKIEENMK FSQCDNPENT DSSSRTSPST FNVGNLSQPV  900
KVDSSSPNLQ HKVGPMETVC TQQAVNSQPS AHALVQAREA DVEALSQLTR AIDKKEAVVS  960
ELRRMNDEVL ENQKGADNCL KDSDSFKKQY AAVLLQLNEV NEQVSFALFC LRQRNSYQAN  1020
SSVKLLKPLA KIGGHGCQLS SFDHSMHHVQ ECVSNVAEIV ESSRMKARSM VNAAMQAMSS  1080
LRKGGKSIER IEDAIDFVNN QLSLDDFSLP ALRSSTPLDS VHSTVTSHDL PTACVSYPSA  1140
TSHIPDVKMQ NFSDQDDLRI PSDIIVHCVA TLLMTQKCTE RQFPPGDVAQ VLDSAVSSLK  1200
PYCSQNLQIY SEVQKCMGII RNQILALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	210	KRRRSESRPRAVGKRTPRVPISFSHDKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein