PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722423.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1223aa MW: 136126 Da PI: 9.3084

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.8	1.3e-09	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a ++ R+ +++ XP_022722423.1 47 QWTKEELEHFYEAYRKYGKD-WKKVATMIR-DRSVEMV 82 6***************99.*******.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1223 aa Download sequence
MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY 60 RKYGKDWKKV ATMIRDRSVE MVEALYTMNR AYLSLPDGTA SVVGLIAMMT DHYCVMGGSD 120 SEQESNEGMG ASKRRPKRSR GKLRDQPSKS LYKPLPDLLH FHSAASSYGC LSLLKRRRSE 180 SRPRAVGKRT PRVPISFSHD KSKGERYFSP IRPGMKLKVD AVDDNVAHVI ALALTEASQR 240 GGSPQVSQTP NRKAETPSPV FNNERMNAES ETISAKILGS EVDEDACELS LGSTEADNAD 300 YSRAKNYSRN IEGTGTVEVQ QKGKRYYRRK PEVEESVNNH LEDTKEACSG TEEGQRLCDL 360 KGKFEAEVAD ANTSRASTKC LRKRSKKVLF GGVEETSFDA LQTLADLSLM MPETAADTES 420 SVLFKEEKNE VVEKTKPKGN HPVPGAKGTA SKQSKQGKLF HHDVHAIPKA KEESHPNNVG 480 MLKRRRKSSP YKLQIPKDET DADSQLGESP NVEASDEVKN LVSKGKRSNN VAHTKQGKSV 540 RPSECMSSSN IAHPKQGKSV RTPERTSASN VGHPKQGKSV RPPERTSSST DHGRDLNTSA 600 PSTIQVSSIH QVNLLKSRVK RKMDAQRPAI GKDIKPSDIV KGKFSVPAML FHDRALNLKA 660 KLCSFLSSYQ ARRWCAFEWF YSTIDYPWFA KREFVEYLDH VGLGHVPRLT RVEWGVIRSS 720 LGKPRRFSEQ FLKEEREKLN QYQESVRTHY ADLRAGIGEG LPTDLARPLS VGQRVIAVHP 780 KTREIHDGSV LIVDHSRYRI QFDSPELGVE FIMDIDCMPS YPLENLPASL LRQNAAICKF 840 AENYSELKMN GQPKESKIEE NMKFSQCDNP ENTDSSSRTS PSTFNVGNLS QPVKVDSSSP 900 NLQHKVGPME TVCTQQAVNS QPSAHALVQA READVEALSQ LTRAIDKKEA VVSELRRMND 960 EVLENQKGAD NCLKDSDSFK KQYAAVLLQL NEVNEQVSFA LFCLRQRNSY QANSSVKLLK 1020 PLAKIGGHGC QLSSFDHSMH HVQECVSNVA EIVESSRMKA RSMVNAAMQA MSSLRKGGKS 1080 IERIEDAIDF VNNQLSLDDF SLPALRSSTP LDSVHSTVTS HDLPTACVSY PSATSHIPDV 1140 KMQNFSDQDD LRIPSDIIVH CVATLLMTQK CTERQFPPGD VAQVLDSAVS SLKPYCSQNL 1200 QIYSEVQKCM GIIRNQILAL VPT

Sequence ? help Back to Top

Protein Sequence Length: 1223 aa Download sequence

MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY  60
RKYGKDWKKV ATMIRDRSVE MVEALYTMNR AYLSLPDGTA SVVGLIAMMT DHYCVMGGSD  120
SEQESNEGMG ASKRRPKRSR GKLRDQPSKS LYKPLPDLLH FHSAASSYGC LSLLKRRRSE  180
SRPRAVGKRT PRVPISFSHD KSKGERYFSP IRPGMKLKVD AVDDNVAHVI ALALTEASQR  240
GGSPQVSQTP NRKAETPSPV FNNERMNAES ETISAKILGS EVDEDACELS LGSTEADNAD  300
YSRAKNYSRN IEGTGTVEVQ QKGKRYYRRK PEVEESVNNH LEDTKEACSG TEEGQRLCDL  360
KGKFEAEVAD ANTSRASTKC LRKRSKKVLF GGVEETSFDA LQTLADLSLM MPETAADTES  420
SVLFKEEKNE VVEKTKPKGN HPVPGAKGTA SKQSKQGKLF HHDVHAIPKA KEESHPNNVG  480
MLKRRRKSSP YKLQIPKDET DADSQLGESP NVEASDEVKN LVSKGKRSNN VAHTKQGKSV  540
RPSECMSSSN IAHPKQGKSV RTPERTSASN VGHPKQGKSV RPPERTSSST DHGRDLNTSA  600
PSTIQVSSIH QVNLLKSRVK RKMDAQRPAI GKDIKPSDIV KGKFSVPAML FHDRALNLKA  660
KLCSFLSSYQ ARRWCAFEWF YSTIDYPWFA KREFVEYLDH VGLGHVPRLT RVEWGVIRSS  720
LGKPRRFSEQ FLKEEREKLN QYQESVRTHY ADLRAGIGEG LPTDLARPLS VGQRVIAVHP  780
KTREIHDGSV LIVDHSRYRI QFDSPELGVE FIMDIDCMPS YPLENLPASL LRQNAAICKF  840
AENYSELKMN GQPKESKIEE NMKFSQCDNP ENTDSSSRTS PSTFNVGNLS QPVKVDSSSP  900
NLQHKVGPME TVCTQQAVNS QPSAHALVQA READVEALSQ LTRAIDKKEA VVSELRRMND  960
EVLENQKGAD NCLKDSDSFK KQYAAVLLQL NEVNEQVSFA LFCLRQRNSY QANSSVKLLK  1020
PLAKIGGHGC QLSSFDHSMH HVQECVSNVA EIVESSRMKA RSMVNAAMQA MSSLRKGGKS  1080
IERIEDAIDF VNNQLSLDDF SLPALRSSTP LDSVHSTVTS HDLPTACVSY PSATSHIPDV  1140
KMQNFSDQDD LRIPSDIIVH CVATLLMTQK CTERQFPPGD VAQVLDSAVS SLKPYCSQNL  1200
QIYSEVQKCM GIIRNQILAL VPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	203	KRRRSESRPRAVGKRTPRVPISFSHDKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein