PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722424.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1197aa MW: 133385 Da PI: 9.4515

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.9	1.3e-09	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a ++ R+ +++ XP_022722424.1 47 QWTKEELEHFYEAYRKYGKD-WKKVATMIR-DRSVEMV 82 6***************99.*******.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1197 aa Download sequence
MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY 60 RKYGKDWKKV ATMIRDRSVE MVEALYTMNR GGSDSEQESN EGMGASKRRP KRSRGKLRDQ 120 PSKSLYKPLP DLLHFHSAAS SYGCLSLLKR RRSESRPRAV GKRTPRVPIS FSHDKSKGER 180 YFSPIRPGMK LKVDAVDDNV AHVIALALTE ASQRGGSPQV SQTPNRKAET PSPVFNNERM 240 NAESETISAK ILGSEVDEDA CELSLGSTEA DNADYSRAKN YSRNIEGTGT VEVQQKGKRY 300 YRRKPEVEES VNNHLEDTKE ACSGTEEGQR LCDLKGKFEA EVADANTSRA STKCLRKRSK 360 KVLFGGVEET SFDALQTLAD LSLMMPETAA DTESSVLFKE EKNEVVEKTK PKGNHPVPGA 420 KGTASKQSKQ GKLFHHDVHA IPKAKEESHP NNVGMLKRRR KSSPYKLQIP KDETDADSQL 480 GESPNVEASD EVKNLVSKGK RSNNVAHTKQ GKSVRPSECM SSSNIAHPKQ GKSVRTPERT 540 SASNVGHPKQ GKSVRPPERT SSSTDHGRDL NTSAPSTIQV SSIHQVNLLK SRVKRKMDAQ 600 RPAIGKDIKP SDIVKGKFSV PAMLFHDRAL NLKAKLCSFL SSYQARRWCA FEWFYSTIDY 660 PWFAKREFVE YLDHVGLGHV PRLTRVEWGV IRSSLGKPRR FSEQFLKEER EKLNQYQESV 720 RTHYADLRAG IGEGLPTDLA RPLSVGQRVI AVHPKTREIH DGSVLIVDHS RYRIQFDSPE 780 LGVEFIMDID CMPSYPLENL PASLLRQNAA ICKFAENYSE LKMNGQPKES KIEENMKFSQ 840 CDNPENTDSS SRTSPSTFNV GNLSQPVKVD SSSPNLQHKV GPMETVCTQQ AVNSQPSAHA 900 LVQAREADVE ALSQLTRAID KKEAVVSELR RMNDEVLENQ KGADNCLKDS DSFKKQYAAV 960 LLQLNEVNEQ VSFALFCLRQ RNSYQANSSV KLLKPLAKIG GHGCQLSSFD HSMHHVQECV 1020 SNVAEIVESS RMKARSMVNA AMQAMSSLRK GGKSIERIED AIDFVNNQLS LDDFSLPALR 1080 SSTPLDSVHS TVTSHDLPTA CVSYPSATSH IPDVKMQNFS DQDDLRIPSD IIVHCVATLL 1140 MTQKCTERQF PPGDVAQVLD SAVSSLKPYC SQNLQIYSEV QKCMGIIRNQ ILALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1197 aa Download sequence

MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY  60
RKYGKDWKKV ATMIRDRSVE MVEALYTMNR GGSDSEQESN EGMGASKRRP KRSRGKLRDQ  120
PSKSLYKPLP DLLHFHSAAS SYGCLSLLKR RRSESRPRAV GKRTPRVPIS FSHDKSKGER  180
YFSPIRPGMK LKVDAVDDNV AHVIALALTE ASQRGGSPQV SQTPNRKAET PSPVFNNERM  240
NAESETISAK ILGSEVDEDA CELSLGSTEA DNADYSRAKN YSRNIEGTGT VEVQQKGKRY  300
YRRKPEVEES VNNHLEDTKE ACSGTEEGQR LCDLKGKFEA EVADANTSRA STKCLRKRSK  360
KVLFGGVEET SFDALQTLAD LSLMMPETAA DTESSVLFKE EKNEVVEKTK PKGNHPVPGA  420
KGTASKQSKQ GKLFHHDVHA IPKAKEESHP NNVGMLKRRR KSSPYKLQIP KDETDADSQL  480
GESPNVEASD EVKNLVSKGK RSNNVAHTKQ GKSVRPSECM SSSNIAHPKQ GKSVRTPERT  540
SASNVGHPKQ GKSVRPPERT SSSTDHGRDL NTSAPSTIQV SSIHQVNLLK SRVKRKMDAQ  600
RPAIGKDIKP SDIVKGKFSV PAMLFHDRAL NLKAKLCSFL SSYQARRWCA FEWFYSTIDY  660
PWFAKREFVE YLDHVGLGHV PRLTRVEWGV IRSSLGKPRR FSEQFLKEER EKLNQYQESV  720
RTHYADLRAG IGEGLPTDLA RPLSVGQRVI AVHPKTREIH DGSVLIVDHS RYRIQFDSPE  780
LGVEFIMDID CMPSYPLENL PASLLRQNAA ICKFAENYSE LKMNGQPKES KIEENMKFSQ  840
CDNPENTDSS SRTSPSTFNV GNLSQPVKVD SSSPNLQHKV GPMETVCTQQ AVNSQPSAHA  900
LVQAREADVE ALSQLTRAID KKEAVVSELR RMNDEVLENQ KGADNCLKDS DSFKKQYAAV  960
LLQLNEVNEQ VSFALFCLRQ RNSYQANSSV KLLKPLAKIG GHGCQLSSFD HSMHHVQECV  1020
SNVAEIVESS RMKARSMVNA AMQAMSSLRK GGKSIERIED AIDFVNNQLS LDDFSLPALR  1080
SSTPLDSVHS TVTSHDLPTA CVSYPSATSH IPDVKMQNFS DQDDLRIPSD IIVHCVATLL  1140
MTQKCTERQF PPGDVAQVLD SAVSSLKPYC SQNLQIYSEV QKCMGIIRNQ ILALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	177	KRRRSESRPRAVGKRTPRVPISFSHDKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein