PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722475.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 620aa MW: 67733.1 Da PI: 9.2702

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	87.7	1.3e-27	89	173	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++ ++ k+plWe+vs+k++e g++rs+k+ +ek+en +k+yk++keg+ ++++++s c +f+qlea XP_022722475.1 89 RWPRQETLALLKIRSDMDATFHDATVKGPLWEDVSRKLAELGYKRSAKKWEEKFENFHKYYKRTKEGRAGHQDGKS--CMFFSQLEA 173 8*******************************************************************966665..*****85 PP
2	trihelix	106.7	1.5e-33	505	589	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k+evlaLi +r+ +e+r++++ k+plW+e+s+ m + g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf+ql+ XP_022722475.1 505 RWPKDEVLALISLRSGLESRYQEAVPKGPLWKEISADMFRMGYKRSSKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHQLD 589 8*******************************************************************8.99999*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence
MQQGGGGGGH QSQYGEMGAQ TTVAVSGSHM VSDQSEQLVE AASPISSRPP ATGNLDELMR 60 LAIGGGDEEG DEGDQPGGGG AAGVSGGNRW PRQETLALLK IRSDMDATFH DATVKGPLWE 120 DVSRKLAELG YKRSAKKWEE KFENFHKYYK RTKEGRAGHQ DGKSCMFFSQ LEALHTTSAT 180 VAVTTATAAS PDVAPVSVGI PMAISSVRIP PTTAIPMSSS MLPMPGSAPA TVPARAPVPA 240 SAPPITKTAA PFGISFSSNS SSSSQGLEDD DGEEDELGGE LSNMAGTSRK RKRQSSRGGG 300 STTRRMMEFF EGLLKQVMQK QEAMQQRYLE AIEKREQDRM IREQAWKRQE MASLTREREL 360 MAQERAISAS RDAAIIYFLQ KITGQTIQLP STVTVPAAPL PSKQTTVPVV PPGAPIPSAA 420 PPLHQPPSLP QQQQRNSQQQ QQSQSHLQHP LQPQVVKPQQ QPQNTEVVRY HQQPIFSEVV 480 MAIPEQQVPP QEVGGSGSLD PASSRWPKDE VLALISLRSG LESRYQEAVP KGPLWKEISA 540 DMFRMGYKRS SKRCKEKWEN INKYFKKVKE SNKKRPEDAK TCPYFHQLDT LYRKKILGGA 600 TSGGSSSFSD QNRPEEETSR

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence

MQQGGGGGGH QSQYGEMGAQ TTVAVSGSHM VSDQSEQLVE AASPISSRPP ATGNLDELMR  60
LAIGGGDEEG DEGDQPGGGG AAGVSGGNRW PRQETLALLK IRSDMDATFH DATVKGPLWE  120
DVSRKLAELG YKRSAKKWEE KFENFHKYYK RTKEGRAGHQ DGKSCMFFSQ LEALHTTSAT  180
VAVTTATAAS PDVAPVSVGI PMAISSVRIP PTTAIPMSSS MLPMPGSAPA TVPARAPVPA  240
SAPPITKTAA PFGISFSSNS SSSSQGLEDD DGEEDELGGE LSNMAGTSRK RKRQSSRGGG  300
STTRRMMEFF EGLLKQVMQK QEAMQQRYLE AIEKREQDRM IREQAWKRQE MASLTREREL  360
MAQERAISAS RDAAIIYFLQ KITGQTIQLP STVTVPAAPL PSKQTTVPVV PPGAPIPSAA  420
PPLHQPPSLP QQQQRNSQQQ QQSQSHLQHP LQPQVVKPQQ QPQNTEVVRY HQQPIFSEVV  480
MAIPEQQVPP QEVGGSGSLD PASSRWPKDE VLALISLRSG LESRYQEAVP KGPLWKEISA  540
DMFRMGYKRS SKRCKEKWEN INKYFKKVKE SNKKRPEDAK TCPYFHQLDT LYRKKILGGA  600
TSGGSSSFSD QNRPEEETSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	2e-45	Trihelix family protein