PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022722578.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 315aa    MW: 35244.2 Da    PI: 7.0297
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022722578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.41.9e-192471148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd++l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
   XP_022722578.1 24 RGPWTVEEDLKLINYITTHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 71
                     89********************************************97 PP
2Myb_DNA-binding50.83.8e-1677120146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022722578.1  77 RGSITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 120
                      7889******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDVKARGCSA NTQSEEDQIM DLRRGPWTVE EDLKLINYIT THGEGRWNSL ARCAGLKRTG  60
KSCRLRWLNY LRPDVRRGSI TLEEQLLILE LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT  120
RVQKHAKQLK CDVNSKQFKD TMRYLWMPRL VERIQAAAAA ATPTSTTAVT EASTTTSASV  180
TTAGNIGMGQ MVMPQGVIGN DFGGVQITPS YTPENSSTAA SSDSLGTQVS PVSDLTDYYS  240
NIPVNNPNPD YLQASQVGYS GSSLISPSGT NYYNHGTDFQ SLEQNNPWLD GADGSYNFLN  300
AEDFFFLQQQ FNFNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06490.11e-92MYB family protein