PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022722855.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 233aa    MW: 25974.2 Da    PI: 7.7154
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022722855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.87.3e-19162196135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C + +Tp+WR gp g+ktLCnaCG++y++ +l
  XP_022722855.1 162 CQHCEAEETPQWRAGPLGPKTLCNACGVRYKSGRL 196
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MEAFDMTACF EDNLLDFGSD VGEEDEDEKH KKFSKINPSS SLNPNCSFPE FAEEELEWLS  60
NKDAFPAVET SFVDMLGTAA KHQSPVSVLD NSNSSGSTTL PNGNVVIHCC GNVKVPVKAR  120
SKRLRKCRDL KNQENSWWVQ ENVKNAIATA KGAGSRTIGR KCQHCEAEET PQWRAGPLGP  180
KTLCNACGVR YKSGRLVPEY RPASSPTFSS ELHSNSHRKI LEMRRHKQLS FLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.11e-51GATA family protein