PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722911.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 261aa MW: 30147.1 Da PI: 9.1099

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722911.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.4	3.8e-19	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+ +G g+W+++ar g++R +k+c++rw +yl XP_022722911.1 21 KGPWTAEEDRLLIEYVRSHGEGRWSSVARLAGLKRNGKSCRLRWVNYL 68 79********************************************97 PP
2	Myb_DNA-binding	49.2	1.2e-15	74	118	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W++Iar ++ gRt++++k++w+++ XP_022722911.1 74 RGQITPHEEGIILELHAKWGNR-WSAIARSLP-GRTDNEIKNYWRTH 118 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MSWAVMAGFL GGAIIEEGWR KGPWTAEEDR LLIEYVRSHG EGRWSSVARL AGLKRNGKSC 60 RLRWVNYLRP DLKRGQITPH EEGIILELHA KWGNRWSAIA RSLPGRTDNE IKNYWRTHFK 120 QKAELSSDNS DKAKTRLLKR QQFQQQQLLQ QQQQQLLQQQ QQLQLNQFDM KRIMSWLDET 180 EHRAPYVPQL KQERAATSYP NMTEEQGLFY PMINGNVSGS DTSSEEILWD GLWNLDDIHG 240 NIGAACATSK VSLHSLVTPF C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	6e-88	MYB family protein