PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722991.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 234aa MW: 27113.4 Da PI: 6.1706

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.4	1.2e-18	30	84	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le+ Fe++ ++ +++ +LA+ lgL+ rq+ +WFqNrRa+ k XP_022722991.1 30 KTKRRFSDEQIRLLESIFESETKLEPRKKLQLARDLGLQPRQIAIWFQNRRARGK 84 67889************************************************88 PP
2	HD-ZIP_I/II	119.8	1.4e-38	31	122	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 krr+s+eq++lLE+ Fe+e+kLep++K +lar+Lglqprq+a+WFqnrRAR k+kq+E+dy++Lk++yd+l+++ e+L ke+++L ++++ XP_022722991.1 31 TKRRFSDEQIRLLESIFESETKLEPRKKLQLARDLGLQPRQIAIWFQNRRARGKSKQIEQDYRTLKANYDSLASRFESLMKEKQSLILQVQK 122 69************************************************************************************988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MEREYYPAAH EAIADQVPQT PRKKKKNKMK TKRRFSDEQI RLLESIFESE TKLEPRKKLQ 60 LARDLGLQPR QIAIWFQNRR ARGKSKQIEQ DYRTLKANYD SLASRFESLM KEKQSLILQV 120 QKLSELLEEP HDINKVSKPG PDGNRTDGGS EYGDTKCERE AEAQPSFQQA GVEDMGFFGL 180 QIEKDKDIEH AGQPLEEFPS MNDSLASPEK LYGFDSADMF DHSCSNSVWF NFWT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	28	PRKKKKNK
2	22	34	RKKKKNKMKTKRR
3	23	35	RKKKKNKMKTKRR
4	79	87	RRARGKSKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61890.1	2e-42	HD-ZIP family protein