PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022723233.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family bHLH
Protein Properties Length: 237aa    MW: 26943.2 Da    PI: 8.7255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022723233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.8e-114287555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +  +ErrRR+++ +++ +Lr+++P       + ++Ka+i e A+ YI++Lq
  XP_022723233.1 42 NLHAERRRRQKLSDRLLTLRSVVPII-----TNMNKATIIEDAITYIQELQ 87
                    5579*********************6.....58*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDMEFVGSDM TILSITDPGP SRGRAGRRKL EDGDNKELKS KNLHAERRRR QKLSDRLLTL  60
RSVVPIITNM NKATIIEDAI TYIQELQKTS QVLSDQLLEM EKSSGEGRNS KRTEVDAAED  120
MKKCGIKEEV QVINIDGNKL LLKIILEKKR GCFTKLMEAM NYLGFELSET NVTTFKGAML  180
FSSCVQGAYG DNLMVKQTQE FLSEIIRRMR NCSECAIDDS KNMTQRILLL IVVERKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12752RRKLEDGDNKELKSKNLHAERRRRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.13e-39bHLH family protein