PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022723339.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 906aa    MW: 100201 Da    PI: 6.4368
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022723339.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.41.4e-23130231199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+       +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++
  XP_022723339.1 130 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLQPPA-QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEK 221
                     99*****************************9777666.49************************************************..8899 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+++++r+
  XP_022723339.1 222 NQLLLGIRRA 231
                     999****997 PP
2Auxin_resp120.71.1e-39256339183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_022723339.1 256 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 339
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 906 aa     Download sequence    
MKLSSAGFNP QTQEDFAGEK RVLNSELWHA CAGPLVCLPP VGSRVVYFPQ GHSEQVAAST  60
NKEVDAHIPN YPSLPPQLIC QLHNVTMHAD VETDEVYAQM TLQPLSLQEQ KEAYLPAELG  120
TPSKQPTNYF CKTLTASDTS THGGFSVPRR AAEKVFPPLD FSLQPPAQEL IARDLHDNEW  180
KFRHIFRGQP KRHLLTTGWS VFVSAKRLVA GDSVLFIWNE KNQLLLGIRR ANRPQTVMPS  240
SVLSSDSMHL GLLAAAAHAA ATNSRFTIFY NPRASPSEFV IPLAKYIKAV YHTRVSVGMR  300
FRMLFETEES SVRRYMGTIT GISDLDPVRW PNSHWRSVKV GWDESTAGER QPRVSLWEIE  360
PLTTFPMYPS PFPLRLKRPW PPGLPSFHGI KDDDLGMNSP FMWLRGDADR GMRSLNFQGI  420
GVTPWMQPRL DASMMGLQTD MYQAMAAAAL QEMRAVDPSK PATASLLQFQ QPQNLPCRPA  480
ALMQPQMLQQ SQPQAFLQGV EDNQHHSQSQ PQAQAQTQPH LLQQQLQQQN SFNNQQQPQQ  540
PLSQQHRQLV DHQQISSVVS AVSLYASASQ SQSSSLQAIS SLCHQQSFSD SNGNPVASPI  600
VSPLHSFLGS FSQDESSNLP NLPGSNPVIT SAAWPSKRAP VEVLSSGSPQ CVLTQVEQLG  660
PPQTNMSQNS ISLPPFPGRE CSIDQEGGID PQSHLLFGVN IEPSSLLMQN GMSSLRGVGS  720
DSDSTTMLFS PNYMSTTGTD FSVNPAMTPS SYIDESGFLQ SPLNVGQGNP QTRTFVKVYK  780
SGSFGRSLDI SKFSSYNELR SELARLFGLE GQLEDPLRSG WQLVFVDREN DVLLLGDDPW  840
PEFVNSVWCI KILSPQEVQQ MGKRGLELLN SVPVQRLSNG SCDDYVSRQD SRNLSSGIAS  900
AGSLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein