PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022723340.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 903aa    MW: 99867.5 Da    PI: 6.5106
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022723340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.41.4e-23127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+       +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++
  XP_022723340.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLQPPA-QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEK 218
                     99*****************************9777666.49************************************************..8899 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+++++r+
  XP_022723340.1 219 NQLLLGIRRA 228
                     999****997 PP
2Auxin_resp120.71.1e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_022723340.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 903 aa     Download sequence    
MKLSSAGFNP QTQEGEKRVL NSELWHACAG PLVCLPPVGS RVVYFPQGHS EQVAASTNKE  60
VDAHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSLQEQKEA YLPAELGTPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSL QPPAQELIAR DLHDNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYIKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSPFP LRLKRPWPPG LPSFHGIKDD DLGMNSPFMW LRGDADRGMR SLNFQGIGVT  420
PWMQPRLDAS MMGLQTDMYQ AMAAAALQEM RAVDPSKPAT ASLLQFQQPQ NLPCRPAALM  480
QPQMLQQSQP QAFLQGVEDN QHHSQSQPQA QAQTQPHLLQ QQLQQQNSFN NQQQPQQPLS  540
QQHRQLVDHQ QISSVVSAVS LYASASQSQS SSLQAISSLC HQQSFSDSNG NPVASPIVSP  600
LHSFLGSFSQ DESSNLPNLP GSNPVITSAA WPSKRAPVEV LSSGSPQCVL TQVEQLGPPQ  660
TNMSQNSISL PPFPGRECSI DQEGGIDPQS HLLFGVNIEP SSLLMQNGMS SLRGVGSDSD  720
STTMLFSPNY MSTTGTDFSV NPAMTPSSYI DESGFLQSPL NVGQGNPQTR TFVKVYKSGS  780
FGRSLDISKF SSYNELRSEL ARLFGLEGQL EDPLRSGWQL VFVDRENDVL LLGDDPWPEF  840
VNSVWCIKIL SPQEVQQMGK RGLELLNSVP VQRLSNGSCD DYVSRQDSRN LSSGIASAGS  900
LDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein