PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022723515.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 838aa    MW: 92383.9 Da    PI: 6.4192
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022723515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.97.1e-181775357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++  +++    +++ +q+kvWFqNrR +ek+
  XP_022723515.1 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQVIRECpilsNIEPKQIKVWFQNRRCREKQ 75
                    5679*****************************************************97 PP
2START176.22e-551613692205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s +++g a+ra+g+v  +++  v+ell+dk+ W ++++++++l+v+ ++  g+++l 
  XP_022723515.1 161 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISYGCTGVAARACGLVGLEPT-RVAELLKDKPSWFRDCRAVDVLNVLPTAngGTIELL 254
                     7899******************************************************.**************************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h++l+ +++++++r+l+
  XP_022723515.1 255 YMQLYAPTTLAPaRDFWLLRYSSVLEDGSLVVCERSLKNTQNGPSmpaVQHFVRAEMLPSGYLIRPCEGGGSIMHIVDHMNLEPWSVPEVVRPLY 349
                     ********************************************999999********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++kt++a+l+++++
  XP_022723515.1 350 ESSAVLAQKTTMAALRQLRQ 369
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 838 aa     Download sequence    
MAMSCKDGKP GSLDNGKYVR YTPEQVEALE RLYHECPKPS SIRRQQVIRE CPILSNIEPK  60
QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN DRLQKQVSQL VYENGYFRQH  120
TQNATMATKD PSCESVVTSG QHHVTPQHPP RDASPAGLLS IAEETLAEFL SKATGTAVEW  180
VQMPGMKPGP DSIGIVAISY GCTGVAARAC GLVGLEPTRV AELLKDKPSW FRDCRAVDVL  240
NVLPTANGGT IELLYMQLYA PTTLAPARDF WLLRYSSVLE DGSLVVCERS LKNTQNGPSM  300
PAVQHFVRAE MLPSGYLIRP CEGGGSIMHI VDHMNLEPWS VPEVVRPLYE SSAVLAQKTT  360
MAALRQLRQI AQEVSQPNMT GWGRRPAALR ALSQRLSRGF NEALNGFTDE GWSMMGNDGM  420
DDITILVNSS PDKLMGLNLS FANGFPSVNN AVLCAKASML LQNVPPAILL RFLREHRSEW  480
ADSSIDAYSA AAVKVGPCNS QGSRVGGFSG QVILPLAHTI EHEEFLEVIK LEGIVHSPED  540
TIMPRDIFLL QLCSGMDENA VGACAELIFA PIDASFADDA PLLPSGFRII PLDSRKEASS  600
PNRTLDLASA LEIGPAGNKA SSDYSANSGC MRSVMTIAFE FAFESHMQEH VASMARQYVR  660
SIISSFQRVA LALSPSHLSS YAGLRTPLGT PEAQTLARWI CQSYRLYMGV ELLKSSGEGS  720
ESILKTLWDH SDAIMCCSLK ALPVFTFTNQ AGLDMLETTL VALQDITLEK IFDDHGRKTL  780
CTEFPQIMQQ GFACLQGGIC LSSMGRPVSY ERAVAWKVLN EEENAHCICF MFVNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein