PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022723688.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 304aa MW: 33965.3 Da PI: 9.6847

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022723688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.6	5.2e-16	32	123	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W+++ + +L++a ++ +l+rg+l++++W++v++++ + ++ +r+ +qCk++++ ++k+yk +k++ + + + +s++p+f++l+a XP_022723688.1 32 CWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKIEKTRVTSSNGTLTSSWPFFERLDA 123 7**************************************99999**********************9999888899*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MGDLMDSLTP STTPTPPSTT PHSRPLPVRE DCWSEEATST LVDAWGRRYL ELNRGNLRQK 60 DWQDVADAVN ALHGHTKKTH RTDVQCKNRI DTIKKKYKIE KTRVTSSNGT LTSSWPFFER 120 LDALIGSNFA AKKLSPSPKM SPKPSPRLSP RIPGSPPMAL PLPLPYRRTP ASATVAALPQ 180 KRPVADDGNF RRNYSAVAAA AAAAESDEEG EESEGQETEG EGEEREGMKR LARAIERFGH 240 VYEKVEGEKL RQMVELEKQR MQFAKDLEVQ RMRMFMDTQV QLERIKRGKG SSGSSGEAYS 300 SSHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	3e-40	Trihelix family protein