PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022723741.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WOX

Protein Properties

Length: 377aa MW: 41371.3 Da PI: 8.4739

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022723741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7.4e-18	51	111	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_022723741.1 51 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 111 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.2	2.7e-36	50	112	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k XP_022723741.1 50 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 112 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MASSNRHWPS MFKSKPCNTH HQWQSDINPS LMSRAPYTSV AGCEERSPEP KPRWNPKPEQ 60 IRILEAIFNS GMVNPPRDEI RKIRAQLQEY GQVGDANVFY WFQNRKSRSK HKLRNIENSK 120 QQPLQNQQAQ ETPPITNITT ITAPSSSSSS SEKSSPKGAK RSTLSLSSPN VIDVSNSPTA 180 SMNQTYFHQP QNEFLNEPFF FPAQQATAGA GFTQGLGFSE LTNVIQVPEQ PVGPCTNLLL 240 SEILSHGSSR KEHEEKMKMQ LQLSYTVTTA PSTHTIAPPN ASTSATITVP LNHHIQGGVE 300 SGAVGPVGAS RSTVFINDVA FEVAVGPFNV REAFGDDAIL INSAGQPVLT NEWGVTLQSL 360 QHGGFYYLVR SLSPFAA

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MASSNRHWPS MFKSKPCNTH HQWQSDINPS LMSRAPYTSV AGCEERSPEP KPRWNPKPEQ  60
IRILEAIFNS GMVNPPRDEI RKIRAQLQEY GQVGDANVFY WFQNRKSRSK HKLRNIENSK  120
QQPLQNQQAQ ETPPITNITT ITAPSSSSSS SEKSSPKGAK RSTLSLSSPN VIDVSNSPTA  180
SMNQTYFHQP QNEFLNEPFF FPAQQATAGA GFTQGLGFSE LTNVIQVPEQ PVGPCTNLLL  240
SEILSHGSSR KEHEEKMKMQ LQLSYTVTTA PSTHTIAPPN ASTSATITVP LNHHIQGGVE  300
SGAVGPVGAS RSTVFINDVA FEVAVGPFNV REAFGDDAIL INSAGQPVLT NEWGVTLQSL  360
QHGGFYYLVR SLSPFAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-61	WOX family protein