PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022723747.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 214aa    MW: 24045 Da    PI: 7.145
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022723747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.86.6e-191763147
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                    k+ien+  r +tfskRr gi KKA+EL +LC+ eva ++fs+ gk +
  XP_022723747.1 17 KKIENEEDRLITFSKRRSGIYKKASELATLCGCEVAFMVFSPAGKPF 63
                    68*****************************************9855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MSGSGKKTKG RQKIEMKKIE NEEDRLITFS KRRSGIYKKA SELATLCGCE VAFMVFSPAG  60
KPFSFGHPSI ESVANRFLNQ NPPPNDNTHP LVEAHRKIRI NQLSQYLNEL LSQLDAEKEK  120
AKMLDLLTHG KQTHGWWEAP TDQLNQQELE KQYSNYEELL SNLYGKINEK SAVATSSLVA  180
PTDPAQFTDT FTTIANEEVP ASFPPGYNHG GQQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04100.13e-46M-type_MADS family protein