PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022723848.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 324aa    MW: 35475.6 Da    PI: 9.3738
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022723848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.92.3e-30162218158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQyq+Il+RRq R kl++++kl +k r+pylheSRh hAl+R+Rg+gGrF
  XP_022723848.1 162 DEPIYVNAKQYQAILRRRQYRSKLDAQNKL-IKVRRPYLHESRHIHALKRARGNGGRF 218
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MQNLHRKDSA QSSMSESLSL KMGVLPQHFH NTKQLSFQFQ DQDSSSTQST GQSYPEVASA  60
GESNVYGKSL ISASSGGNET HGKHVGGHAK LASSIGTQEY VFPSSQVDYR KSIAHFPLHY  120
SETLSGGVLA AAYGPQAMQI DHPHMMAMVP ARVPLPLQLT EDEPIYVNAK QYQAILRRRQ  180
YRSKLDAQNK LIKVRRPYLH ESRHIHALKR ARGNGGRFLN TKKVQESKCI PTSNGLDMSR  240
SPQLHLSANI SKSEVHQLQN YKDAASATSC SDVTTASNSD EMFQQPDLRF SGYPFNFSGG  300
MPGHTDDIHG GGGGGNLHHL SGLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.17e-68NF-YA family protein