PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724050.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 311aa    MW: 34249.6 Da    PI: 9.783
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.4e-1257101147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_022724050.1  57 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 101
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MVSKKKNPAE GFYLDPTGMA LPGLGPFTTT STVASTVSSS EDPDKKIRKP YTITKSRESW  60
TEPEHDKFLE ALQLFDRDWK KIEAFVGSKT VIQIRSHAQK YFLKVQKNGT SEHLPPPRPK  120
RKAAHPYPQK ASKSAHGHPQ VSGPFQSSAD LLDNGYVLRS DPSSMRMNSI TSAAASSWTN  180
NAQTISFSQA KKGPGMANNS CSSIESAPKT KQVGEITDQG NQVLPDFAQV YSFIGSVFDP  240
NTTGHVQKLK KMDPIDVETV LLLMKNLSIN LTSPDFEDHR RLLSSYEIDK ETSNHGGACK  300
AVYNNQSKSI T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-108MYB_related family protein