PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724119.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 269aa MW: 31058.5 Da PI: 9.6268

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724119.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.7	2.3e-31	51	100	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_022724119.1 51 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA 100 79***********************************************8 PP
2	K-box	115	7.3e-38	120	215	6	100
K-box 6 gks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ ++ea+a+ +qqe++kL+++i+nLq+++R++lGe+L+sL +k+L++Le++Lek++++iRskKnell++++e++qkke +l+++n+ Lr+k++ XP_022724119.1 120 NTGlVSEANAQFYQQEADKLRDQIRNLQNSNRNMLGESLGSLPMKDLKNLETRLEKGISRIRSKKNELLFAEMEYMQKKEIDLHNNNQLLRAKIA 214 344699***************************************************************************************98 PP K-box 100 e 100 e XP_022724119.1 215 E 215 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MLLSSVGDVL DMIVLFIMDF SLSQLAIMVN PNEPCENSPQ KKMGRGKIEI KRIENTTNRQ 60 VTFCKRRNGL LKKAYELSVL CDAEVALIVF SNRGRLYEYA NNSVKTTIER YKKASADSAN 120 TGLVSEANAQ FYQQEADKLR DQIRNLQNSN RNMLGESLGS LPMKDLKNLE TRLEKGISRI 180 RSKKNELLFA EMEYMQKKEI DLHNNNQLLR AKIAENERKQ QDMNLMPGGS NFEVMHSQQF 240 DSRNYFQVND SMHYNPTITA PTRTRWPFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	1e-116	MIKC_MADS family protein