PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724195.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 363aa MW: 41161 Da PI: 5.9745

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724195.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.1	5.5e-20	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t +++ g+ R++k+c++rw +yl XP_022724195.1 14 KGPWTPEEDQKLIDYIQKHGCGNWRTLPKYAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	51	3.4e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg ++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_022724195.1 67 RGGFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 78899***************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGCGNWRTL PKYAGLQRCG KSCRLRWTNY 60 LRPDIKRGGF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKKLLRMG 120 IDPVTHSPRL DLLDLSSILS SSDLYNQSQM NMSRLLGVQS FFNPELLRLA TSLMSPQREN 180 QNQNQNQNFL LQNVEENRLC SSQGQNRYQP LVQSNHLPTQ VQEIPSCNSL NTPCSIPFSN 240 EAQVMNLNVD QCPSNLTDLS DWQGNAIPSN LTEDYVPLMP NYNYYGSDQT LAPSAETSIF 300 HSNNSNQSFS FASVISTRSS SPTPLNSSST YINSCSTEDE RESYCSNILK LEIPDILEAN 360 EFM

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGCGNWRTL PKYAGLQRCG KSCRLRWTNY  60
LRPDIKRGGF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKKLLRMG  120
IDPVTHSPRL DLLDLSSILS SSDLYNQSQM NMSRLLGVQS FFNPELLRLA TSLMSPQREN  180
QNQNQNQNFL LQNVEENRLC SSQGQNRYQP LVQSNHLPTQ VQEIPSCNSL NTPCSIPFSN  240
EAQVMNLNVD QCPSNLTDLS DWQGNAIPSN LTEDYVPLMP NYNYYGSDQT LAPSAETSIF  300
HSNNSNQSFS FASVISTRSS SPTPLNSSST YINSCSTEDE RESYCSNILK LEIPDILEAN  360
EFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-101	MYB family protein