PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724214.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 606aa MW: 66178.8 Da PI: 7.577

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.1e-09	491	539	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_022724214.1 491 AWTLSEVMKLVEGVSKYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 539 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MEAVVEVQGS DEGKFVETAL EKSNLVLSSP RHVADPVVYK LVRVEGDGRL VPATDDELME 60 VEGLLENEKC ETHIVADTGH ALVCTSNEAS SSGMPQLESS EGLSQSENTE ADTAKLSACL 120 EEMVPSGAQS LSDDHVTQSV SVVEGSKPLD GPIEGGSSTS ASCISLKPDF SKLKGEICLD 180 NLSIKELHEV FKATFGRDTT VKDKQWLKRR IAMGLTNSCD VSTTTIVIKD NKLVKKGKVD 240 SSNNVDLGTG KEHPAIGVEY HEVSLNNHGI QIDEHQTTSG TRLENNDLEN NCAIEDLAVD 300 QRAAKRVRKP TKRYIEELSE AKSKEDGGRL ITSTKNIGIR PSVLKSHARP ARNASLEGRT 360 VIIRLDSLGG SGIQVPCVYR VRRSRPRKNV MALLKYHPSD MGMTATFVRK GLDVRSSQMD 420 NGSLNKVLEA NSTSEQTPQQ FVTESKKEKP SAELGQNMAP KYVDPSGDTS DDKVVTVPTA 480 KGGTRRKHHR AWTLSEVMKL VEGVSKYGAG RWSEIKRLAF ASYSYRTSVD LKDKWRNLLK 540 ASFAQTPADK GVNSRKHPSM PIPAPILLRV RELAEMQAQV PPPNLGVTKQ AVCDDRSVNE 600 ARPGYL

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MEAVVEVQGS DEGKFVETAL EKSNLVLSSP RHVADPVVYK LVRVEGDGRL VPATDDELME  60
VEGLLENEKC ETHIVADTGH ALVCTSNEAS SSGMPQLESS EGLSQSENTE ADTAKLSACL  120
EEMVPSGAQS LSDDHVTQSV SVVEGSKPLD GPIEGGSSTS ASCISLKPDF SKLKGEICLD  180
NLSIKELHEV FKATFGRDTT VKDKQWLKRR IAMGLTNSCD VSTTTIVIKD NKLVKKGKVD  240
SSNNVDLGTG KEHPAIGVEY HEVSLNNHGI QIDEHQTTSG TRLENNDLEN NCAIEDLAVD  300
QRAAKRVRKP TKRYIEELSE AKSKEDGGRL ITSTKNIGIR PSVLKSHARP ARNASLEGRT  360
VIIRLDSLGG SGIQVPCVYR VRRSRPRKNV MALLKYHPSD MGMTATFVRK GLDVRSSQMD  420
NGSLNKVLEA NSTSEQTPQQ FVTESKKEKP SAELGQNMAP KYVDPSGDTS DDKVVTVPTA  480
KGGTRRKHHR AWTLSEVMKL VEGVSKYGAG RWSEIKRLAF ASYSYRTSVD LKDKWRNLLK  540
ASFAQTPADK GVNSRKHPSM PIPAPILLRV RELAEMQAQV PPPNLGVTKQ AVCDDRSVNE  600
ARPGYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	382	388	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-124	MYB_related family protein