PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724293.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 578aa    MW: 62571.7 Da    PI: 5.2878
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS339.17.7e-1042165782374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++++e+A a+s+g+   ++++L+rl + a+ +g++ qRl  +++  L++r+++    + +  p+ e     s+e++aa++l+s++sP++++++ 
  XP_022724293.1 216 KQTIVEVASAISEGKSDVVNEILTRLAQVANANGNSEQRLMECMLLSLKSRVNS----VENPPPVAEL---FSKEHAAATQLLSDLSPCFNLGFS 303
                     57899************************************************9....4443344333...49********************** PP

            GRAS  97 taNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     taN aIl+a+  +   +++H+iDfdi+qG Q++ Ll+ L++R +g+p +++iT++++  +g  e+l+ +g++L+++Ae +gv ++fnv+++ +l+
  XP_022724293.1 304 TANLAILDATLDQpscNKLHVIDFDIGQGRQYIDLLHVLSERGSGKPaMVKITAIAD--NGGDERLKMVGDKLSQIAEGCGVCLKFNVVASLKLS 396
                     *********998878899************************9766659********..77***************************8888*** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     dl+ e+L + p+E laVn++++l+r++desv +e++rde+L+ vk+l P vv++veqe+++n+++F+ r+ ea+ yy alfds+e+++ r+++er
  XP_022724293.1 397 DLSRESLCCGPDEPLAVNFAFKLYRMPDESVFVENPRDELLRRVKGLAPSVVTLVEQELNTNTAPFASRVGEACAYYGALFDSIESTVFRDNSER 491
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      k+E+  l r+i n vaceg++r+er+e ++kWr r+++aGF+  pls+++a+++++ l+     g++v+ee+g + +gW++r+L+++SaWr
  XP_022724293.1 492 LKLEEG-LFRKIANSVACEGRDRVERCEVFGKWRVRMSMAGFELKPLSQSVAESMRARLN----PGFTVKEENGGVSFGWMGRTLTVASAWR 578
                     ******.889*****************************************999998774....69*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    
MASRFSGGGP DFYGGLAGRS AANNGTMSNN QPTATYRTQS PGILMDPSSQ IVNGAAPSLM  60
GKRTLADFQT QQHQNNHPRL NGLYLRSRYG VPLLQQLRPQ QLPLGITSGA TIQAVNPALS  120
GAPYMNLVQA RVVQPQDREE KMMNQLQELE KQLLDDDEGD AFSVITDTSS EWSETIQNLI  180
GSSSPNNPIA PSPTSSTTSS SSSTSSVASP ASICSKQTIV EVASAISEGK SDVVNEILTR  240
LAQVANANGN SEQRLMECML LSLKSRVNSV ENPPPVAELF SKEHAAATQL LSDLSPCFNL  300
GFSTANLAIL DATLDQPSCN KLHVIDFDIG QGRQYIDLLH VLSERGSGKP AMVKITAIAD  360
NGGDERLKMV GDKLSQIAEG CGVCLKFNVV ASLKLSDLSR ESLCCGPDEP LAVNFAFKLY  420
RMPDESVFVE NPRDELLRRV KGLAPSVVTL VEQELNTNTA PFASRVGEAC AYYGALFDSI  480
ESTVFRDNSE RLKLEEGLFR KIANSVACEG RDRVERCEVF GKWRVRMSMA GFELKPLSQS  540
VAESMRARLN PGFTVKEENG GVSFGWMGRT LTVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-164GRAS family protein