PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724349.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 668aa MW: 74979.9 Da PI: 7.1533

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.6e-05	63	84	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_022724349.1 63 KCDKCSREFCSPINYRRHIRVH 84 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MKSEEPNDSL DTFIRQAIGK ESFLSFSRAG DNPVQWIQLL HALDQQDIPG WPLLTPLKVQ 60 MQKCDKCSRE FCSPINYRRH IRVHHRLKKL DKDSAKNRDL LAAFWDKLSE DEAKEVISFK 120 DVSLEEVPGS SVIKSLTALL KRPGFSALPL VCLRAGSALL DLVQARPSRF PVSSQELFSI 180 LDDASERTFL FGVAVSIQKY IFDGEAGKIG LETKNLVACT SFLVEQKLVK AWLADKDAEA 240 LRCQKLLVEE EEAAQKRQVE LLERKKQKKL RQKEQKAKEQ RQWEVEEDKQ NNDDSLEVNI 300 PAETSSTLAA FDSDGQNPVI STYQVLPSVE PIHISKPEED VDYEIQMGFS NGYCDSGTSQ 360 NVESRMEQVG GHQRIVVTRW QTPPKSHKGV LNDFHASQNS HRLKFGGMNK HGTKRERVAA 420 MGNSNKMWSR KSKAVYDGKS LRIREEKQTT NQLDQNKNHE VLIGSISVML GNCSYLEVNN 480 LAEACHRCLA ECQIPKKNNV QEKFSQLDPV QGVTNRSTIK FWRPVSQREG QSSLPVQNGV 540 KEFEVEVIAE KDGVQTFDES CLRLYATDRN DGVVSTNLSS TLEESVQPGS LQFDSHVAKA 600 FLARRWKEAI AGGHVTLVLS PNLEPPGCSE VENDSSEKWM DKAGAFEAST GGAAKGKFRT 660 MPEKVAKM

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MKSEEPNDSL DTFIRQAIGK ESFLSFSRAG DNPVQWIQLL HALDQQDIPG WPLLTPLKVQ  60
MQKCDKCSRE FCSPINYRRH IRVHHRLKKL DKDSAKNRDL LAAFWDKLSE DEAKEVISFK  120
DVSLEEVPGS SVIKSLTALL KRPGFSALPL VCLRAGSALL DLVQARPSRF PVSSQELFSI  180
LDDASERTFL FGVAVSIQKY IFDGEAGKIG LETKNLVACT SFLVEQKLVK AWLADKDAEA  240
LRCQKLLVEE EEAAQKRQVE LLERKKQKKL RQKEQKAKEQ RQWEVEEDKQ NNDDSLEVNI  300
PAETSSTLAA FDSDGQNPVI STYQVLPSVE PIHISKPEED VDYEIQMGFS NGYCDSGTSQ  360
NVESRMEQVG GHQRIVVTRW QTPPKSHKGV LNDFHASQNS HRLKFGGMNK HGTKRERVAA  420
MGNSNKMWSR KSKAVYDGKS LRIREEKQTT NQLDQNKNHE VLIGSISVML GNCSYLEVNN  480
LAEACHRCLA ECQIPKKNNV QEKFSQLDPV QGVTNRSTIK FWRPVSQREG QSSLPVQNGV  540
KEFEVEVIAE KDGVQTFDES CLRLYATDRN DGVVSTNLSS TLEESVQPGS LQFDSHVAKA  600
FLARRWKEAI AGGHVTLVLS PNLEPPGCSE VENDSSEKWM DKAGAFEAST GGAAKGKFRT  660
MPEKVAKM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	270	ERKKQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-149	C2H2 family protein