PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724350.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 185aa    MW: 20315 Da    PI: 8.1016
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.42.9e-4410108199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGas v+kll+ l +++reda++sl+yeAear+rdPvyG+vg i+ lq+q+++l++el+
  XP_022724350.1  10 PCAACKFLRRKCMPNCIFAPYFPPEEPQKFANVHKIFGASSVTKLLNVLLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELD 104
                     7*********************************************************************************************9 PP

          DUF260  96 llke 99 
                     ++++
  XP_022724350.1 105 AANA 108
                     9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MASSSSYNSP CAACKFLRRK CMPNCIFAPY FPPEEPQKFA NVHKIFGASS VTKLLNVLLP  60
HQREDAVNSL AYEAEARVRD PVYGCVGAIS FLQRQVQRLQ KELDAANADL IRYACSEITT  120
AFPAPPVASS IQPLTPRNRT ADFNRSIGYK GGGFYQSPGA LPLPYSFPWN DNSSGDMNDG  180
EKGDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.22e-74LBD family protein