PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724455.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 363aa MW: 40519.1 Da PI: 8.8801

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.7	5.7e-25	74	117	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e XP_022724455.1 74 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 117 79***************************************998 PP
2	QLQ	60.7	4.1e-21	9	42	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT++Q+q+L++Q+l++Ky+++++P+PpeL++ + XP_022724455.1 9 PFTPTQWQELEHQALIFKYMVSGVPIPPELIFSV 42 9*****************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MISARNRCPF TPTQWQELEH QALIFKYMVS GVPIPPELIF SVKTSLDSSL ASGLFSHQPI 60 GWGCFQVGFG RKADPEPGRC RRTDGKKWRC SKEAYPDSKY CERHMHRGRN RSRKPVEVNS 120 TAAACTTTPT ATPILSPSFS SISISTSSNC SLPSSSSFSF SPLSSSPIAP EIYNHHNSNQ 180 TTPLNPFFYS HSSTSTRPPG SGLSVQSDTS PHHFLDSGTG IPHRYRFVHG TREGVDERSF 240 FPEASGSVRV VPDSYQPLTV SSYKSYLQSE FQGIHDIGSK QRQQQQEQHC FVLGTDIKSG 300 RPIKLEKDDE TQKPVHQFFG DWPPRNTESW LDLASNPGVH SGKFNFTIIF SPFSYKFLST 360 SHT

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MISARNRCPF TPTQWQELEH QALIFKYMVS GVPIPPELIF SVKTSLDSSL ASGLFSHQPI  60
GWGCFQVGFG RKADPEPGRC RRTDGKKWRC SKEAYPDSKY CERHMHRGRN RSRKPVEVNS  120
TAAACTTTPT ATPILSPSFS SISISTSSNC SLPSSSSFSF SPLSSSPIAP EIYNHHNSNQ  180
TTPLNPFFYS HSSTSTRPPG SGLSVQSDTS PHHFLDSGTG IPHRYRFVHG TREGVDERSF  240
FPEASGSVRV VPDSYQPLTV SSYKSYLQSE FQGIHDIGSK QRQQQQEQHC FVLGTDIKSG  300
RPIKLEKDDE TQKPVHQFFG DWPPRNTESW LDLASNPGVH SGKFNFTIIF SPFSYKFLST  360
SHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-65	GRF family protein