PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724469.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 737aa MW: 80438 Da PI: 7.1097

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724469.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.7	1.3e-24	157	258	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + ++ XP_022724469.1 157 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyN-QQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGED 248 99**************************963.3445679********************************************..4499 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r XP_022724469.1 249 GELRLGIRRV 258 99***985 PP
2	Auxin_resp	116.9	1.7e-38	283	365	1	82
Auxin_resp 1 aahaastksvFevvYnP.rastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 ++ha+s+ksvF+++YnP ras+seF+++++k+ k+l++++s+GmRfkm+feted+ err++G+v+g+ d+dpvrWp+SkWr+L XP_022724469.1 283 VVHAISMKSVFSIYYNPsRASSSEFIIPLHKFWKSLDHSFSIGMRFKMRFETEDAVERRYTGLVTGIGDMDPVRWPGSKWRCL 365 689************7799***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 737 aa Download sequence
MGGLIDLNTT EDDETPLSGS LSPSSSSASV LSVSGAAASG SSSSSSVCLE LWHACAGPLI 60 SLPKRGSVVV YFPQGHLEQV SDFSGVAAAY DLPPHVICRV VDVKLHAEGA TDEVYSQVSL 120 VPESEQIEQK LQERKTEAAG EDEDAEVDIK STTPHMFCKT LTASDTSTHG GFSVPRRAAE 180 DCFPPLDYNQ QRPSQELVAK DLHGLEWRFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA 240 VLFLRGEDGE LRLGIRRVTQ IKNGTSFPSL CSQQLNSSTF VDVVHAISMK SVFSIYYNPS 300 RASSSEFIIP LHKFWKSLDH SFSIGMRFKM RFETEDAVER RYTGLVTGIG DMDPVRWPGS 360 KWRCLLVRWD DIDTNRHCRV SPWEIESSGS ISSSNILLTP GSKRSRVGLP SGKPEFVVTD 420 GIGASNFGES SRFPKVLQGQ EILGFNTLYD GADSQNMHQS DIRRCFPGSN GSGIAAIGNV 480 GRDPPVNPDI SYKGVGFGES FQFHKVLQGQ EIFVSPSYRR GPTADENREN DGPGVSDAGQ 540 LSGTRSRWSS LMQGHNAHSR ILPSAQVSSP SSVLMFQHAS NPIPNLNSEE KEQGVNKRGS 600 FRAPETCGGK LLPSSAGEYN SRPRDLGSVD SFGHSIAFVQ LGDTHPLAAQ PAFRTTQELA 660 SSCKSSCRLF GFSLTEGRHD ATKEDNMVQA TSSLAPGAFL PRIGEQFHPK PPAMTNTVRS 720 NCTKGILRHC LKNYDIY

Sequence ? help Back to Top

Protein Sequence Length: 737 aa Download sequence

MGGLIDLNTT EDDETPLSGS LSPSSSSASV LSVSGAAASG SSSSSSVCLE LWHACAGPLI  60
SLPKRGSVVV YFPQGHLEQV SDFSGVAAAY DLPPHVICRV VDVKLHAEGA TDEVYSQVSL  120
VPESEQIEQK LQERKTEAAG EDEDAEVDIK STTPHMFCKT LTASDTSTHG GFSVPRRAAE  180
DCFPPLDYNQ QRPSQELVAK DLHGLEWRFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA  240
VLFLRGEDGE LRLGIRRVTQ IKNGTSFPSL CSQQLNSSTF VDVVHAISMK SVFSIYYNPS  300
RASSSEFIIP LHKFWKSLDH SFSIGMRFKM RFETEDAVER RYTGLVTGIG DMDPVRWPGS  360
KWRCLLVRWD DIDTNRHCRV SPWEIESSGS ISSSNILLTP GSKRSRVGLP SGKPEFVVTD  420
GIGASNFGES SRFPKVLQGQ EILGFNTLYD GADSQNMHQS DIRRCFPGSN GSGIAAIGNV  480
GRDPPVNPDI SYKGVGFGES FQFHKVLQGQ EIFVSPSYRR GPTADENREN DGPGVSDAGQ  540
LSGTRSRWSS LMQGHNAHSR ILPSAQVSSP SSVLMFQHAS NPIPNLNSEE KEQGVNKRGS  600
FRAPETCGGK LLPSSAGEYN SRPRDLGSVD SFGHSIAFVQ LGDTHPLAAQ PAFRTTQELA  660
SSCKSSCRLF GFSLTEGRHD ATKEDNMVQA TSSLAPGAFL PRIGEQFHPK PPAMTNTVRS  720
NCTKGILRHC LKNYDIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein