PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724479.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 398aa MW: 43515.4 Da PI: 8.2352

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.7	3.4e-14	80	167	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + ++ ++++pk qCk++++ ++k+yk +k+ + + s++++f++l+ XP_022724479.1 80 CWSEGGTAVLIDAWGERYLELSRGNLKQKHWKEVADIVsGREDYTKTPKtdiQCKNRIDTVKKKYKLEKAKIAAG--GGPSKWVFFEKLD 167 7***********************************856666666543339*************99997..67778****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEEDEEIQSH PSAAGTGSPS ASSPSPTSNG RITVTVAAGP PSDPPPPEEP LQHENTLTLA 60 LPPPQQPKNI GGGGGGREDC WSEGGTAVLI DAWGERYLEL SRGNLKQKHW KEVADIVSGR 120 EDYTKTPKTD IQCKNRIDTV KKKYKLEKAK IAAGGGPSKW VFFEKLDQLI GPTAKSTAKI 180 SVNAAAVGGG SGGSAGLLSK VPMAIPVGIR SSLNSFRVSQ VQERQQQQQK QPRTVVLKNQ 240 NKMQLRKRGP VDMDSEEEED DEEEEEEADS LDSLPPPPTG KRARTVVHKG INSGGKGRKW 300 GNSVRELTQA ILRFGEAYEH AESAKLQQVV EMEKQRMEFA KELELQRMQF FIKTQMEISQ 360 LKHGRRGGGI WNSSNHHSKI NNSSNNNNNN NNNSDSSN

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEEDEEIQSH PSAAGTGSPS ASSPSPTSNG RITVTVAAGP PSDPPPPEEP LQHENTLTLA  60
LPPPQQPKNI GGGGGGREDC WSEGGTAVLI DAWGERYLEL SRGNLKQKHW KEVADIVSGR  120
EDYTKTPKTD IQCKNRIDTV KKKYKLEKAK IAAGGGPSKW VFFEKLDQLI GPTAKSTAKI  180
SVNAAAVGGG SGGSAGLLSK VPMAIPVGIR SSLNSFRVSQ VQERQQQQQK QPRTVVLKNQ  240
NKMQLRKRGP VDMDSEEEED DEEEEEEADS LDSLPPPPTG KRARTVVHKG INSGGKGRKW  300
GNSVRELTQA ILRFGEAYEH AESAKLQQVV EMEKQRMEFA KELELQRMQF FIKTQMEISQ  360
LKHGRRGGGI WNSSNHHSKI NNSSNNNNNN NNNSDSSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	2e-49	Trihelix family protein