PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724485.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family SBP
Protein Properties Length: 145aa    MW: 16429.2 Da    PI: 7.8431
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP129.89.7e-4158136278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS..EEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr..fhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cqv++C+ad+++ak+yh+rhkvCe+h+ka++v ++gl+qrfCqqCsr  fhelsefDe+krsCrrrLa+hnerrrk+++
  XP_022724485.1  58 CQVDNCTADMTDAKRYHKRHKVCEFHAKASMVRIAGLHQRFCQQCSRlmFHELSEFDEAKRSCRRRLAGHNERRRKSSS 136
                     **********************************************9889**************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MATSKTDGKR SLKEMTEDEE EEEDEDSTDA IGFGDDIEKK KKGKRGSSAG GGSTLPGCQV  60
DNCTADMTDA KRYHKRHKVC EFHAKASMVR IAGLHQRFCQ QCSRLMFHEL SEFDEAKRSC  120
RRRLAGHNER RRKSSSEYQG EGSNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.17e-45SBP family protein