PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724568.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 203aa    MW: 23027.8 Da    PI: 10.3606
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.74.8e-213174245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                     ++++  rqvtfskRr g++KKA+EL +LC+a+va+++fs+ gk
  XP_022724568.1 31 MVKDSGSRQVTFSKRRSGLFKKANELATLCAAQVAIVVFSPGGK 74
                    5788999**********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MLICPENNVL FLPPKYLRKK IMGRRKIEMK MVKDSGSRQV TFSKRRSGLF KKANELATLC  60
AAQVAIVVFS PGGKPFSFGH PSVEAVAQRF LNQEAKPKVS IPGQQVESQQ ETKVEKLSQR  120
LNDLLKQLEA EKKRGEMLDK AIKANGKRKY EKPINELNLH ELLEMKQSME ELRENLKGRV  180
NEIEASSSLL LLSNNAVKEA DHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.12e-47M-type_MADS family protein